RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CYP26A1O43174 497 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 ARHGAP6O43182 974 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 DFNA5O60443 496 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 BRINP1O60477 761 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 SEMA4FO95754 770 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 PENKP01210 267 aaPredicted RBP17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 ITGAVP06756 1048 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 RARGP13631 454 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 CCDC130P13994 396 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 C10orf120Q5SQS8 335 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 ANKS1BQ7Z6G8 1248 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 ACOT1Q86TX2 421 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 OR2T3Q8NH03 318 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 JAKMIP2Q96AA8 810 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 PIWIL1Q96J94 861 aaKnown RBP17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 BTBD1Q9H0C5 482 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 KIAA1586Q9HCI6 787 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 KNTC1P50748 2209 aa17.12■□□□□ 0.33
CTDNEP1-211ENST00000575783 A0A1B0GTQ1 180 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 ERVH48-1M5A8F1 160 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 TSPAN3O60637 253 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 STC2O76061 302 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 BMP15O95972 392 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 KLKB1P03952 638 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 C1SP09871 688 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 CDK4P11802 303 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 ABCB4P21439 1286 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 BCAT1P54687 386 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 KCNC4Q03721 635 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 E2F5Q15329 346 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 SNRNP35Q16560 246 aaKnown RBP17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 SCARA5Q6ZMJ2 495 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 SPACA3Q8IXA5 215 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 EID2Q8N6I1 236 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 SLC2A14Q8TDB8 520 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 CGRRF1Q99675 332 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 ACE2Q9BYF1 805 aaPredicted RBP17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 CLEC4EQ9ULY5 219 aa17.11■□□□□ 0.33
CTDNEP1-211ENST00000575783 PHACTR2O75167 634 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 HMBSP08397 361 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 ACTN2P35609 894 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 CHKAP35790 457 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 KCNH2Q12809 1159 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 TMEM215Q68D42 235 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 GPRIN1Q7Z2K8 1008 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 ZNF366Q8N895 744 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 FAM181AQ8N9Y4 354 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 SYAP1Q96A49 352 aaPredicted RBP17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 NAF1Q96HR8 494 aaKnown RBP17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 ELF4Q99607 663 aaPredicted RBP17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 PANK2Q9BZ23 570 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 XYLT2Q9H1B5 865 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 ZNF510Q9Y2H8 683 aa17.1■□□□□ 0.33
CTDNEP1-211ENST00000575783 FAM47DPA6NHR8 397 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 PAPSS1O43252 624 aaPredicted RBP17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 TIMM44O43615 452 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 CYBBP04839 570 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 ATICP31939 592 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 ACADVLP49748 655 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 CAMK2GQ13555 558 aaPredicted RBP17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 PSMD6Q15008 389 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 EIF4HQ15056 248 aaKnown RBP17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 FNDC3BQ53EP0 1204 aaKnown RBP17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 FBXL19Q6PCT2 694 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 KLHDC10Q6PID8 442 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 HPS3Q969F9 1004 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 LGMNQ99538 433 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 CSNK1G1Q9HCP0 422 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 NAGPAQ9UK23 515 aa17.09■□□□□ 0.33
CTDNEP1-211ENST00000575783 MUC22E2RYF6 1773 aaPredicted RBP17.08■□□□□ 0.33
CTDNEP1-211ENST00000575783 FRMD3A2A2Y4 597 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 VILLO15195 856 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 DNTTP04053 509 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 GJB2P29033 226 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 ADORA2BP29275 332 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 CORO1AP31146 461 aaKnown RBP17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 CYP2J2P51589 502 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 RACK1P63244 317 aaKnown RBP17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 CYP24A1Q07973 514 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 STXBP4Q6ZWJ1 553 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 C12orf29Q8N999 325 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 RBBP8NLQ8NC74 664 aaPredicted RBP17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 GANCQ8TET4 914 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 DDI1Q8WTU0 396 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 CYB5D2Q8WUJ1 264 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 SLC6A18Q96N87 628 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 ORAI3Q9BRQ5 295 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 SEMA4CQ9C0C4 833 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 SDCBP2Q9H190 292 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 FAM49BQ9NUQ9 324 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 PLA2G4CQ9UP65 541 aa17.08■□□□□ 0.32
CTDNEP1-211ENST00000575783 B8ZZF3 427 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms