RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PHTF2Q8N3S3 785 aa10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 ANKRD20A12PQ8NF67 263 aa10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 UBA3Q8TBC4 463 aa10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 RNF139Q8WU17 664 aa10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 UBXN6Q9BZV1 441 aa10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 VPS45Q9NRW7 570 aa10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 OLA1Q9NTK5 396 aaKnown RBP10.12□□□□□ -0.79
NPLOC4-216ENST00000574344 SPTBN2O15020 2390 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 CKAP5Q14008 2032 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 A0A0A0MRY4 1105 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 PPP1R3GB7ZBB8 358 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 PIK3R2O00459 728 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 GREM1O60565 184 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 ADAM23O75077 832 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 FGFR1OPO95684 399 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 GNA14O95837 355 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 HNRNPLP14866 589 aaKnown RBP eCLIP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 ERCC5P28715 1186 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 NTSR1P30989 418 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 CHKAP35790 457 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 RGS7P49802 495 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 BYSLQ13895 437 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 MORC3Q14149 939 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 TPD52L1Q16890 204 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 DNTTIP2Q5QJE6 756 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 EGFLAMQ63HQ2 1017 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 TCEAL6Q6IPX3 200 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 Q6ZNB5 142 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 TOGARAM2Q6ZUX3 1019 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 ARMCX6Q7L4S7 300 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 RRAGAQ7L523 313 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 DENND1CQ8IV53 801 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 FMNL3Q8IVF7 1028 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 ZNF276Q8N554 614 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 RBBP8NLQ8NC74 664 aaPredicted RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 RLN3Q8WXF3 142 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 NDRG1Q92597 394 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 EDEM1Q92611 657 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 TCEAL3Q969E4 200 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 PLD4Q96BZ4 506 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 EDEM2Q9BV94 578 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 SRRTQ9BXP5 876 aaKnown RBP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 MARK1Q9P0L2 795 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.11□□□□□ -0.79
NPLOC4-216ENST00000574344 NYNRINQ9P2P1 1898 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 BCLAF3A2AJT9 711 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 O00370 1275 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 P4HA2O15460 535 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 AFPP02771 609 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 PAEPP09466 180 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 KRT5P13647 590 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 BMP6P22004 513 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 BRD2P25440 801 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 HARS2P49590 506 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 KCNH2Q12809 1159 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 STILQ15468 1287 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 PPM1JQ5JR12 505 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 PLA2G2CQ5R387 149 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 RNF43Q68DV7 783 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 LPCAT2Q7L5N7 544 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 ARHGEF19Q8IW93 802 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 UBR7Q8N806 425 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 KCNV2Q8TDN2 545 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 DDI1Q8WTU0 396 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 PIGKQ92643 395 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 KAT5Q92993 513 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 NAP1L5Q96NT1 182 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 CNGB3Q9NQW8 809 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 CACNA2D2Q9NY47 1150 aa10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 AGO1Q9UL18 857 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-216ENST00000574344 ATXN2Q99700 1313 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 GON4LQ3T8J9 2241 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 YJEFN3A6XGL0 299 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 PRRT4C9JH25 899 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 E7ENQ6 273 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 PMM2O15305 246 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 AP5Z1O43299 807 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 CALCAP01258 141 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 KLKB1P03952 638 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 GABRG2P18507 467 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 CDK11BP21127 795 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 P2RY2P41231 377 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 DAOAP59103 153 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 FANCCQ00597 558 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 GCNT1Q02742 428 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 RPL6Q02878 288 aaKnown RBP10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 ARID5AQ03989 594 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 STARD3Q14849 445 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 FILIP1LQ4L180 1135 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 STPG1Q5TH74 334 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 BSPRYQ5W0U4 402 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 PM20D1Q6GTS8 502 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 FOXR2Q6PJQ5 311 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 LCLAT1Q6UWP7 414 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 ANKS1BQ7Z6G8 1248 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 TRIM59Q8IWR1 403 aa10.09□□□□□ -0.79
NPLOC4-216ENST00000574344 TMEFF1Q8IYR6 380 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms