RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 FAM3CQ92520 227 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 RUBCNQ92622 972 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 RMDN1Q96DB5 314 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 VCPIP1Q96JH7 1222 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 SLC2A13Q96QE2 648 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 PCDHB18PQ96TA0 734 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 DDX23Q9BUQ8 820 aaKnown RBP11.5□□□□□ -0.57
CHD3-216ENST00000573936 OSBPL6Q9BZF3 934 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 LINC00597Q9H2U6 94 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 HPS4Q9NQG7 708 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 ZNHIT6Q9NWK9 470 aaKnown RBP11.5□□□□□ -0.57
CHD3-216ENST00000573936 GTSE1Q9NYZ3 720 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 ADAM22Q9P0K1 906 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 NAALADL1Q9UQQ1 740 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 CEP250Q9BV73 2442 aa11.5□□□□□ -0.57
CHD3-216ENST00000573936 OTOGLQ3ZCN5 2332 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 GPR179Q6PRD1 2367 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 SPECC1L-ADORA2AF8WAN1 911 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 GREM1O60565 184 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 DAB1O75553 588 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 ADH1CP00326 375 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 DCNP07585 359 aaKnown RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 GZMAP12544 262 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 CORO1AP31146 461 aaKnown RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 MATKP42679 507 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 TBX4P57082 545 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 GAD2Q05329 585 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 C1QBPQ07021 282 aaKnown RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 MTA1Q13330 715 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 DHCR24Q15392 516 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 PREPLQ4J6C6 727 aaPredicted RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 DCAF6Q58WW2 860 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 FAM102AQ5T9C2 384 aaPredicted RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 NUGGCQ68CJ6 796 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 Q6ZNB5 142 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 MMS22LQ6ZRQ5 1243 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 ZNF571Q7Z3V5 609 aaPredicted RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 BBS7Q8IWZ6 715 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 DEFB106AQ8N104 65 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 OR8K1Q8NGG5 319 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 TTC8Q8TAM2 541 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 DQX1Q8TE96 717 aaKnown RBP11.49□□□□□ -0.57
CHD3-216ENST00000573936 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 MRFAP1L1Q96HT8 127 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 SYT11Q9BT88 431 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHD3-216ENST00000573936 SLC12A6Q9UHW9 1150 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 STAP1Q9ULZ2 295 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 TLR6Q9Y2C9 796 aa11.49□□□□□ -0.57
CHD3-216ENST00000573936 MIA3Q5JRA6 1907 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 CACNA1BQ00975 2339 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 MED19A0JLT2 244 aaPredicted RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 AKR1B15C9JRZ8 316 aaPredicted RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 GOLGA8SH3BPF8 625 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 GRAP2O75791 330 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 TRUB2O95900 331 aaKnown RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 F9P00740 461 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 SLC2A3P11169 496 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 ADH5P11766 374 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 SKILP12757 684 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 HNRNPH3P31942 346 aaKnown RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 CTHP32929 405 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 GJA4P35212 333 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 MAGEA9P43362 315 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 SLC11A2P49281 568 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 ARID5BQ14865 1188 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 UBXN2BQ14CS0 331 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 TAF5Q15542 800 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 SYPL2Q5VXT5 272 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 TAC4Q86UU9 113 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 C1orf210Q8IVY1 113 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 WBP2Q969T9 261 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 TRIM11Q96F44 468 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 DDX50Q9BQ39 737 aaKnown RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 C11orf70Q9BRQ4 267 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD3-216ENST00000573936 SELENOOQ9BVL4 669 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 FOXQ1Q9C009 403 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 LTB4R2Q9NPC1 389 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 SPHK2Q9NRA0 654 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 AGO1Q9UL18 857 aaKnown RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 HELZP42694 1942 aaKnown RBP11.48□□□□□ -0.57
CHD3-216ENST00000573936 CACNA1IQ9P0X4 2223 aa11.48□□□□□ -0.57
CHD3-216ENST00000573936 FAM170BA6NMN3 283 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD3-216ENST00000573936 TRDMT1O14717 391 aaKnown RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 IRAK2O43187 625 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 MSI1O43347 362 aaKnown RBP11.47□□□□□ -0.57
CHD3-216ENST00000573936 RTN2O75298 545 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 IGLV3-25P01717 112 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 IGLV3-27P01718 113 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 APOEP02649 317 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 KLKB1P03952 638 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 CYBBP04839 570 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 CYP17A1P05093 508 aa11.47□□□□□ -0.57
CHD3-216ENST00000573936 KRT3P12035 628 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms