RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 BAG2O95816 211 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 CYP2F1P24903 491 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 AP2B1P63010 937 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 INCA1Q0VD86 236 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 LBX2Q6XYB7 198 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 TIFABQ6ZNK6 161 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 SCUBE3Q8IX30 993 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 C1orf21Q9H246 121 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 MOCS1Q9NZB8 636 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 NR2E3Q9Y5X4 410 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 GJA3Q9Y6H8 435 aa19.7■□□□□ 0.74
SCARF1-206ENST00000573852 NOP56O00567 594 aaKnown RBP19.69■□□□□ 0.74
SCARF1-206ENST00000573852 DPYSL4O14531 572 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 SERPINB9P50453 376 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 GOLGA7BQ2TAP0 167 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 SLC10A6Q3KNW5 377 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 MBLAC2Q68D91 279 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 USP6NLQ92738 828 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 SH3GL3Q99963 347 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 NDE1Q9NXR1 346 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 DNAJC16Q9Y2G8 782 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 P4HA1P13674 534 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 AOC1P19801 751 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 TPSB2P20231 275 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 SDC4P31431 198 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 HDAC4P56524 1084 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 RPL10AP62906 217 aaKnown RBP19.69■□□□□ 0.74
SCARF1-206ENST00000573852 SLC25A3Q00325 362 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 TPSAB1Q15661 275 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 TEDDM1Q5T9Z0 273 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 NCAPG2Q86XI2 1143 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 CCNJLQ8IV13 435 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 CDKL3Q8IVW4 592 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-206ENST00000573852 EXOC8Q8IYI6 725 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 GSTCDQ8NEC7 633 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 PPP1R14CQ8TAE6 165 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 PPP1R16BQ96T49 567 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 ZNF670Q9BS34 389 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 F5H423 210 aaPredicted RBP19.69■□□□□ 0.74
SCARF1-206ENST00000573852 PRKG1Q13976 671 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 KYAT3Q6YP21 454 aaKnown RBP19.69■□□□□ 0.74
SCARF1-206ENST00000573852 ATG14Q6ZNE5 492 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 PLPPR4Q7Z2D5 763 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 CPB2Q96IY4 423 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 TBCBQ99426 244 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 ECSITQ9BQ95 431 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 IFT122Q9HBG6 1241 aa19.69■□□□□ 0.74
SCARF1-206ENST00000573852 TNS1Q9HBL0 1735 aaKnown RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 GABBR2O75899 941 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 ATP5BP06576 529 aaKnown RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 FGF3P11487 239 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 ATXN1P54253 815 aaKnown RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 PDE1BQ01064 536 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 DSG1Q02413 1049 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 EN1Q05925 392 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 GSTA3Q16772 222 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 PPP1R26Q5T8A7 1209 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 RIOX2Q8IUF8 465 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 NT5C1AQ9BXI3 368 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 B3GNT5Q9BYG0 378 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 GPAMQ9HCL2 828 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 SOX13Q9UN79 622 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 WDR27A2RRH5 827 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 MDM4O15151 490 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 ALDOAP04075 364 aaKnown RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 KCNA4P22459 653 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 L1CAMP32004 1257 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 CRADDP78560 199 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 RABGAP1LQ5R372 815 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 CELF3Q5SZQ8 465 aaKnown RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 N4BP2L1Q5TBK1 243 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 TMCO4Q5TGY1 634 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 KCNT2Q6UVM3 1135 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 TTC30AQ86WT1 665 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 POU5F2Q8N7G0 328 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 PIWIL2Q8TC59 973 aaKnown RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 NR1H4Q96RI1 486 aaPredicted RBP19.68■□□□□ 0.74
SCARF1-206ENST00000573852 MIS12Q9H081 205 aa19.68■□□□□ 0.74
SCARF1-206ENST00000573852 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-206ENST00000573852 LYNP07948 512 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 ZCCHC18P0CG32 403 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 CRABP2P29373 138 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 SLC6A3Q01959 620 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 CWF19L1Q69YN2 538 aaKnown RBP19.67■□□□□ 0.74
SCARF1-206ENST00000573852 C4orf22Q6V702 233 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 WDR75Q8IWA0 830 aaKnown RBP19.67■□□□□ 0.74
SCARF1-206ENST00000573852 DNAJB4Q9UDY4 337 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 SOCS7O14512 581 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 PAPSS1O43252 624 aaPredicted RBP19.67■□□□□ 0.74
SCARF1-206ENST00000573852 BUD23O43709 281 aaKnown RBP19.67■□□□□ 0.74
SCARF1-206ENST00000573852 CALRP27797 417 aaKnown RBP19.67■□□□□ 0.74
SCARF1-206ENST00000573852 SLC1A6P48664 564 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 CDC16Q13042 620 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 TMEM132DQ14C87 1099 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 AMHR2Q16671 573 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 RALGPS1Q5JS13 557 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 GALNT15Q8N3T1 639 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 COPS5Q92905 334 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 PDZD7Q9H5P4 517 aa19.67■□□□□ 0.74
SCARF1-206ENST00000573852 DHX35Q9H5Z1 703 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms