RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SLC9A3R1O14745 358 aaPredicted RBP7.84□□□□□ -1.15
NUP88-205ENST00000572809 COCHO43405 550 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 LILRB5O75023 590 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 ATG13O75143 517 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 NFATC1O95644 943 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 ZDHHC11BP0C7U3 371 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 ACO1P21399 889 aaKnown RBP7.84□□□□□ -1.15
NUP88-205ENST00000572809 DRD1P21728 446 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 UBE2HP62256 183 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 SATB1Q01826 763 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 LRMPQ12912 555 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 CAMK4Q16566 473 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 CCDC40Q4G0X9 1142 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 FSTL4Q6MZW2 842 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 FOXR2Q6PJQ5 311 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 Q6ZS52 159 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 DDX42Q86XP3 938 aaKnown RBP eCLIP7.84□□□□□ -1.15
NUP88-205ENST00000572809 ETFBKMTQ8IXQ9 262 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 SUMF1Q8NBK3 374 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 SLC4A11Q8NBS3 891 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 NELFBQ8WX92 580 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 CD101Q93033 1021 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 SLC35C1Q96A29 364 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 CHFRQ96EP1 664 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 DUSP9Q99956 384 aaKnown RBP7.84□□□□□ -1.15
NUP88-205ENST00000572809 P2RY13Q9BPV8 354 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 DUSP16Q9BY84 665 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 NUCKS1Q9H1E3 243 aaKnown RBP7.84□□□□□ -1.15
NUP88-205ENST00000572809 SUV39H2Q9H5I1 410 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 FAM124BQ9H5Z6 455 aaPredicted RBP7.84□□□□□ -1.15
NUP88-205ENST00000572809 CCSER2Q9H7U1 834 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 TLR8Q9NR97 1041 aaKnown RBP7.84□□□□□ -1.15
NUP88-205ENST00000572809 SMPD4Q9NXE4 827 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 GMIPQ9P107 970 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 CFAP97Q9P2B7 532 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 TBC1D14Q9P2M4 693 aa7.84□□□□□ -1.15
NUP88-205ENST00000572809 KIF26AQ9ULI4 1882 aaPredicted RBP7.83□□□□□ -1.16
NUP88-205ENST00000572809 E2F8A0AVK6 867 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 PAPSS2O95340 614 aaPredicted RBP7.83□□□□□ -1.16
NUP88-205ENST00000572809 GNA14O95837 355 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 EGFP01133 1207 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 TDGF1P13385 188 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 ATP5C1P36542 298 aaKnown RBP7.83□□□□□ -1.16
NUP88-205ENST00000572809 FMO5P49326 533 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 PGFP49763 221 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 TUBP50607 506 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 RAD23BP54727 409 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 STX17P56962 302 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 YWHAEP62258 255 aaKnown RBP7.83□□□□□ -1.16
NUP88-205ENST00000572809 CETN1Q12798 172 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 CUL2Q13617 745 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 FBXO43Q4G163 708 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 ARHGAP17Q68EM7 881 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 TTI2Q6NXR4 508 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 RHBDF2Q6PJF5 856 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 ATCAYQ86WG3 371 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 TREML1Q86YW5 311 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 TRIML1Q8N9V2 468 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 EDARADDQ8WWZ3 215 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 EDEM1Q92611 657 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 JAKMIP2Q96AA8 810 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 SRRTQ9BXP5 876 aaKnown RBP7.83□□□□□ -1.16
NUP88-205ENST00000572809 UBXN6Q9BZV1 441 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 NACA2Q9H009 215 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 PNPLA8Q9NP80 782 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 KIAA1257Q9ULG3 409 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 SCML2Q9UQR0 700 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 SH3BP1Q9Y3L3 701 aa7.83□□□□□ -1.16
NUP88-205ENST00000572809 PATJQ8NI35 1801 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 C1QTNF9BB2RNN3 333 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 CHURC1-FNTBB4DL54 471 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 K7ESF4 209 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 SCAMP3O14828 347 aaKnown RBP7.82□□□□□ -1.16
NUP88-205ENST00000572809 PMM2O15305 246 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 P4HA2O15460 535 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 TLR5O60602 858 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 FGFR1OPO95684 399 aaKnown RBP7.82□□□□□ -1.16
NUP88-205ENST00000572809 TBX18O95935 607 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 RARGP13631 454 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 TBXAS1P24557 533 aaPredicted RBP7.82□□□□□ -1.16
NUP88-205ENST00000572809 CNR2P34972 360 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 ANP32AP39687 249 aaKnown RBP7.82□□□□□ -1.16
NUP88-205ENST00000572809 FNTBP49356 437 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 KIF11P52732 1056 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 SLC8A3P57103 927 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 PAK1Q13153 545 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 DHCR24Q15392 516 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 SGO2Q562F6 1265 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 NAIF1Q69YI7 327 aaPredicted RBP7.82□□□□□ -1.16
NUP88-205ENST00000572809 HEATR6Q6AI08 1181 aaKnown RBP7.82□□□□□ -1.16
NUP88-205ENST00000572809 HTR3DQ70Z44 454 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 GPRIN1Q7Z2K8 1008 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 LONP2Q86WA8 852 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 ZNF276Q8N554 614 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 CAMKK1Q8N5S9 505 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 ANKRD52Q8NB46 1076 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 CCDC26Q8TAB7 109 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 RUBCNQ92622 972 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 OTUB2Q96DC9 234 aa7.82□□□□□ -1.16
NUP88-205ENST00000572809 FAM129BQ96TA1 746 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms