RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 TBL3Q12788 808 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CHIT1Q13231 466 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PCLAFQ15004 111 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PROSER3Q2NL68 480 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 TWISTNBQ3B726 338 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 TRIM60Q495X7 471 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 NRN1LQ496H8 165 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ANKRD20A4Q4UJ75 823 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ANKRD20A8PQ5CZ79 823 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ANKRD20A2Q5SQ80 823 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ANKRD20A1Q5TYW2 823 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ANKRD20A3Q5VUR7 823 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CST9LP1Q5W188 147 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 HEPHL1Q6MZM0 1159 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 KIAA1841Q6NSI8 718 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SARM1Q6SZW1 724 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ATG14Q6ZNE5 492 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 GADL1Q6ZQY3 521 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SYT13Q7L8C5 426 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ATG9AQ7Z3C6 839 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MTERF4Q7Z6M4 381 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 FAM35AQ86V20 835 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PPP1R3BQ86XI6 285 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 UNC5CLQ8IV45 518 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 P3H2Q8IVL5 708 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 RHOT2Q8IXI1 618 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CNTROBQ8N137 903 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 BBOF1Q8ND07 529 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SH3RF2Q8TEC5 729 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC13A3Q8WWT9 602 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MRPS27Q92552 414 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 DDX17Q92841 729 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 SAAL1Q96ER3 474 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MRGPRX4Q96LA9 322 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CFAP57Q96MR6 1250 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 CMTM3Q96MX0 182 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 FDXACB1Q9BRP7 624 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 HEMGNQ9BXL5 484 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MRPL1Q9BYD6 325 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 NFKBIZQ9BYH8 718 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 UBE2OQ9C0C9 1292 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MTMR12Q9C0I1 747 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 IQCGQ9H095 443 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 VPS16Q9H269 839 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 TAOK3Q9H2K8 898 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 C19orf44Q9H6X5 657 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 MMRN2Q9H8L6 949 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 RAD18Q9NS91 495 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ZDHHC7Q9NXF8 308 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 HSPBP1Q9NZL4 362 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ZNF70Q9UC06 446 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PPIEQ9UNP9 301 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ZNF281Q9Y2X9 895 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 ASB3Q9Y575 518 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PCDHGA5Q9Y5G8 931 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 PCDHGA1Q9Y5H4 931 aa5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 BRD4O60885 1362 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-210ENST00000572787 KIF16BQ96L93 1317 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TRBC2A0A5B9 178 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 FRMD3A2A2Y4 597 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SLC9B1P1A6NJY1 282 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 OR6C76A6NM76 312 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 J3QL48 77 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 IGF2BP3O00425 579 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MEIS1O00470 390 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 POLR2DO15514 142 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TNFSF14O43557 240 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ADAM11O75078 769 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 PSMD10O75832 226 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SEC14L2O76054 403 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 LRIG2O94898 1065 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 UPP2O95045 317 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 LETM1O95202 739 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MATN4O95460 622 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 PRAMEF1O95521 474 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SRCP12931 536 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SELLP14151 372 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CPB1P15086 417 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 VAV1P15498 845 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 ERCC2P18074 760 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 JAK1P23458 1154 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 PTPN3P26045 913 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 IDUAP35475 653 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GPD2P43304 727 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 BAG6P46379 1132 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GCLCP48506 637 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 KCNJ5P48544 419 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 NRIP1P48552 1158 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CDK7P50613 346 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 PRKCEQ02156 737 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CCDC173Q0VFZ6 552 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 GPS1Q13098 491 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TUBB3Q13509 450 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 TRA2AQ13595 282 aaKnown RBP eCLIP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 SNTB1Q13884 538 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CBFBQ13951 182 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 NEDD9Q14511 834 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 MED22Q15528 200 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 CHRNA2Q15822 529 aa5.25□□□□□ -1.57
TOPBP1-210ENST00000572787 HFEQ30201 348 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms