RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 HOXC11O43248 304 aaPredicted RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 SYNCRIPO60506 623 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 CYP11A1P05108 521 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 ACADMP11310 421 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 CYP3A5P20815 502 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 TGM2P21980 687 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 CYP2F1P24903 491 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 COPAP53621 1224 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 RACK1P63244 317 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 AKAP17AQ02040 695 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 PTK2Q05397 1052 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 STARD3Q14849 445 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 PPP2R5AQ15172 486 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 OCLNQ16625 522 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 ANO4Q32M45 955 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 GRAMD4Q6IC98 578 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 C14orf80Q86SX3 495 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 HEATR4Q86WZ0 1026 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 METTL23Q86XA0 190 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 SLC25A45Q8N413 288 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 RUFY2Q8WXA3 655 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 PRCCQ92733 491 aaPredicted RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 ARRDC3Q96B67 414 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 TCEANC2Q96MN5 208 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 TARS2Q9BW92 718 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 ABCG4Q9H172 646 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 PCED1AQ9H1Q7 454 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 DNAJC17Q9NVM6 304 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 ERRFI1Q9UJM3 462 aaPredicted RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 UBQLN1Q9UMX0 589 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 PCDHA4Q9UN74 947 aa7.36□□□□□ -1.23
CHD3-213ENST00000571249 TMA7Q9Y2S6 64 aaKnown RBP7.36□□□□□ -1.23
CHD3-213ENST00000571249 TP53BP1Q12888 1972 aaPredicted RBP7.35□□□□□ -1.23
CHD3-213ENST00000571249 ANAPC1Q9H1A4 1944 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 K7EM74 188 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 ABLIM1O14639 778 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 HNRNPRO43390 633 aaKnown RBP7.35□□□□□ -1.23
CHD3-213ENST00000571249 NADKO95544 446 aaPredicted RBP7.35□□□□□ -1.23
CHD3-213ENST00000571249 LDLRP01130 860 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 IGHV4-34P06331 123 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 XRCC6P12956 609 aaKnown RBP eCLIP7.35□□□□□ -1.23
CHD3-213ENST00000571249 NR1D1P20393 614 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 SLC7A9P82251 487 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 ZBTB6Q15916 424 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 MANEAQ5SRI9 462 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 MPZL3Q6UWV2 235 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 ZSCAN1Q8NBB4 408 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 GALNT11Q8NCW6 608 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 C9orf43Q8TAL5 461 aaPredicted RBP7.35□□□□□ -1.23
CHD3-213ENST00000571249 HPS3Q969F9 1004 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 ABHD17AQ96GS6 310 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 ZBTB45Q96K62 511 aaPredicted RBP7.35□□□□□ -1.23
CHD3-213ENST00000571249 IFT74Q96LB3 600 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 SLC12A9Q9BXP2 914 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 MRPL4Q9BYD3 311 aaKnown RBP7.35□□□□□ -1.23
CHD3-213ENST00000571249 GDF3Q9NR23 364 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 TBC1D14Q9P2M4 693 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 TJP2Q9UDY2 1190 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 DSEQ9UL01 958 aa7.35□□□□□ -1.23
CHD3-213ENST00000571249 LY6G6EA0A0G2JKS1 128 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CCDC196A0A1B0GTZ2 297 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 PRR19A6NJB7 356 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 M0R2N6 131 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CYB561D2O14569 222 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 SLC27A2O14975 620 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 YKT6O15498 198 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CCNT1O60563 726 aaKnown RBP7.34□□□□□ -1.23
CHD3-213ENST00000571249 REC8O95072 547 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 BAG4O95429 457 aaKnown RBP7.34□□□□□ -1.23
CHD3-213ENST00000571249 SEMA4FO95754 770 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CXCL8P10145 99 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 PFKLP17858 780 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CYP11B2P19099 503 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 PROZP22891 400 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CHMLP26374 656 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 RXRGP48443 463 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 ARRB1P49407 418 aaPredicted RBP7.34□□□□□ -1.23
CHD3-213ENST00000571249 BCAT1P54687 386 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 MRPL49Q13405 166 aaKnown RBP7.34□□□□□ -1.23
CHD3-213ENST00000571249 WSCD1Q658N2 575 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 CRTC1Q6UUV9 634 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 SPNS3Q6ZMD2 512 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 SV2AQ7L0J3 742 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 ZFAND4Q86XD8 727 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 SPATS2Q86XZ4 545 aaKnown RBP7.34□□□□□ -1.23
CHD3-213ENST00000571249 JAMLQ86YT9 394 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 SCN4BQ8IWT1 228 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 BLIDQ8IZY5 108 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 MAPK15Q8TD08 544 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 WBP2Q969T9 261 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 LURAP1Q96LR2 239 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 PYM1Q9BRP8 204 aaKnown RBP7.34□□□□□ -1.23
CHD3-213ENST00000571249 SLC26A6Q9BXS9 759 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 PLEKHA5Q9HAU0 1116 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 ZSWIM6Q9HCJ5 1215 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 SPHK2Q9NRA0 654 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 UCKL1Q9NWZ5 548 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 TRPM5Q9NZQ8 1165 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 TUBD1Q9UJT1 453 aa7.34□□□□□ -1.23
CHD3-213ENST00000571249 U3KQA8 63 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms