RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 KDM1AO60341 852 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 LHX1P48742 406 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 KCNT2Q6UVM3 1135 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 PPP2R3CQ969Q6 453 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 ECSITQ9BQ95 431 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 GPAMQ9HCL2 828 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 BANF1O75531 89 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 ITGAVP06756 1048 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 TPH1P17752 444 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 CNTN2Q02246 1040 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 GPR141Q7Z602 305 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 RPRD1AQ96P16 312 aaPredicted RBP15.77■□□□□ 0.11
CIITA-204ENST00000570546 IKZF4Q9H2S9 585 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.11
CIITA-204ENST00000570546 NR5A2O00482 541 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 B3GAT3O94766 335 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 USP1O94782 785 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 CYBBP04839 570 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 PRKAA1Q13131 559 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 NAB1Q13506 487 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 DMC1Q14565 340 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 CES3Q6UWW8 571 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 KYAT3Q6YP21 454 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 RNPEPL1Q9HAU8 725 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 LSM7Q9UK45 103 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 TRIM13O60858 407 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 PSMG1O95456 288 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 CLPTM1O96005 669 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 PDK4Q16654 411 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 GNASQ5JWF2 1037 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 UGT3A1Q6NUS8 523 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 OSMRQ99650 979 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 UNKQ9C0B0 810 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 A1CFQ9NQ94 594 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 NCF1BA6NI72 391 aaPredicted RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 NCF1CA8MVU1 366 aaPredicted RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 SNHG28P0DPA3 235 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 NCF1P14598 390 aaPredicted RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 RPL22P35268 128 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 NOMO3P69849 1222 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 CDH17Q12864 832 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 VSIG10LQ86VR7 867 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 TAGAPQ8N103 731 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 IL31RAQ8NI17 732 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 LRRC39Q96DD0 335 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 LZTS1Q9Y250 596 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 A0A096LPK6 155 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 C2orf81A6NN90 581 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 STX7O15400 261 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 PEX5P50542 639 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 FKBP1CQ5VVH2 108 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 LRRC8BQ6P9F7 803 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 CRELD2Q6UXH1 353 aaPredicted RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 CELF6Q96J87 481 aaKnown RBP15.76■□□□□ 0.11
CIITA-204ENST00000570546 PCDHB18PQ96TA0 734 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 PCDHB8Q9UN66 801 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 PPP2R3BQ9Y5P8 575 aa15.76■□□□□ 0.11
CIITA-204ENST00000570546 UBDO15205 165 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 RAG1P15918 1043 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 GRIK4Q16099 956 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 IYDQ6PHW0 289 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 HORMAD1Q86X24 394 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 VTI1BQ9UEU0 232 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 H3BRB1 525 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 ATXN8OSP0DMR3 200 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 TAS2R40P59535 323 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 POU6F1Q14863 301 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 OASLQ15646 514 aaKnown RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 AGKQ53H12 422 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 ZCWPW1Q9H0M4 648 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 TUT1Q9H6E5 874 aaKnown RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 IRAK4Q9NWZ3 460 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 PRKAG2Q9UGJ0 569 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 FECHP22830 423 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 YY1P25490 414 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 HOXD10P28358 340 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 NPY2RP49146 381 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 MAP3K10Q02779 954 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 NFYCQ13952 458 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 GALNTL6Q49A17 601 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 ELMSAN1Q6PJG2 1045 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 XPNPEP3Q9NQH7 507 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 CACNA1FO60840 1977 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 LTN1O94822 1766 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 hCG_1818297A0A087WSY0 165 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 A0A0B4J269 797 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 STRNO43815 780 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 SHOX2O60902 331 aaPredicted RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 PDE5AO76074 875 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 TRUB2O95900 331 aaKnown RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 ZNF23P17027 643 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 YWHAZP63104 245 aaKnown RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 C15orf59Q2T9L4 293 aaPredicted RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 SLC22A9Q8IVM8 553 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 SLC16A10Q8TF71 515 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 NMD3Q96D46 503 aaKnown RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 TRIM45Q9H8W5 580 aaPredicted RBP15.75■□□□□ 0.11
CIITA-204ENST00000570546 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 TBC1D13Q9NVG8 400 aa15.75■□□□□ 0.11
CIITA-204ENST00000570546 DDX43Q9NXZ2 648 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms