RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 HLA-EP13747 358 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 CD59P13987 128 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 PRKCHP24723 683 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 CD6P30203 668 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 HOXD12P35452 270 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 DPP6P42658 865 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 TKTL1P51854 596 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 COG7P83436 770 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 PNOCQ13519 176 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF234Q14588 700 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 STARD3Q14849 445 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 NFIL3Q16649 462 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 GOLGA7BQ2TAP0 167 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZCWPW2Q504Y3 356 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 DCAF17Q5H9S7 520 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 TCERG1LQ5VWI1 586 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 TADA2BQ86TJ2 420 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 FAM124AQ86V42 546 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 TMPRSS6Q8IU80 811 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZCCHC9Q8N567 271 aaKnown RBP9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF366Q8N895 744 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 PNPLA1Q8N8W4 532 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 FBXL13Q8NEE6 735 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 UBA3Q8TBC4 463 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 DDI1Q8WTU0 396 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 EDEM1Q92611 657 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ERCC4Q92889 916 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 GATA6Q92908 595 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF419Q96HQ0 510 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 RAB20Q9NX57 234 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 CLIC5Q9NZA1 410 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 THAP10Q9P2Z0 257 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 SFMBT1Q9UHJ3 866 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 FBXO10Q9UK96 956 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 STRIP2Q9ULQ0 834 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 PCDH15Q96QU1 1955 aa9.02□□□□□ -0.97
CTDNEP1-203ENST00000570385 AKAP13Q12802 2813 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 FAM237AA0A1B0GTK4 181 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 A0A1W2PQD8 194 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 GFRA2O00451 464 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 PIK3R2O00459 728 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CETN3O15182 167 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 SYNCRIPO60506 623 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZBED1O96006 694 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CYBBP04839 570 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 EPHX1P07099 455 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 SYPP08247 313 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 EPB41P11171 864 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 NCAM1P13591 858 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CD19P15391 556 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 GNSP15586 552 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 GTF2H1P32780 548 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CHKAP35790 457 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 TPMTP51580 245 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 PMS1P54277 932 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ARID5AQ03989 594 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 PDE4CQ08493 712 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ADIGQ0VDE8 80 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 GRIK2Q13002 908 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ACACAQ13085 2346 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CBWD6Q4V339 395 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CBWD3Q5JTY5 395 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CBWD5Q5RIA9 395 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 SYCP2LQ5T4T6 812 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 TMEM215Q68D42 235 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ANKS1BQ7Z6G8 1248 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 FMNL3Q8IVF7 1028 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 KDF1Q8NAX2 398 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ANKRD52Q8NB46 1076 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CYB5D2Q8WUJ1 264 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 UCMAQ8WVF2 138 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZCCHC14Q8WYQ9 949 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 SIPA1Q96FS4 1042 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 PIWIL1Q96J94 861 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 CDK5RAP1Q96SZ6 601 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 DCLK3Q9C098 648 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 DNAI2Q9GZS0 605 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 LRRC4Q9HBW1 653 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ITM2CQ9NQX7 267 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ELOVL2Q9NXB9 296 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 WSB2Q9NYS7 404 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 TSPAN16Q9UKR8 245 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 ZNF510Q9Y2H8 683 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLC27A6Q9Y2P4 619 aa9.01□□□□□ -0.97
CTDNEP1-203ENST00000570385 SRRM3A6NNA2 597 aaPredicted RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 MSI1O43347 362 aaKnown RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 CALCAP01258 141 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 LCP1P13796 627 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 PRCPP42785 496 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 RGS7P49802 495 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 SLC8A3P57103 927 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 CUL2Q13617 745 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 TRIP6Q15654 476 aaKnown RBP9□□□□□ -0.97
CTDNEP1-203ENST00000570385 RAB41Q5JT25 222 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 WDR45BQ5MNZ6 344 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 DCAF12L1Q5VU92 463 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 BSPRYQ5W0U4 402 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 ARHGAP17Q68EM7 881 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 ISM2Q6H9L7 571 aa9□□□□□ -0.97
CTDNEP1-203ENST00000570385 SERPINA13PQ6UXR4 307 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms