RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 FYB2Q5VWT5 728 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 DENND1CQ8IV53 801 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 TRIML1Q8N9V2 468 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 TATDN2Q93075 761 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 PLD4Q96BZ4 506 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 MRGPRX1Q96LB2 322 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 HSPA12BQ96MM6 686 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 GTPBP4Q9BZE4 634 aaKnown RBP13.75□□□□□ -0.21
SPG7-221ENST00000569720 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 CD248Q9HCU0 757 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 OLA1Q9NTK5 396 aaKnown RBP13.75□□□□□ -0.21
SPG7-221ENST00000569720 SUSD2Q9UGT4 822 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 AGO1Q9UL18 857 aaKnown RBP13.75□□□□□ -0.21
SPG7-221ENST00000569720 STON1Q9Y6Q2 735 aa13.75□□□□□ -0.21
SPG7-221ENST00000569720 UPK3BL1B0FP48 263 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 WASH3PC4AMC7 463 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 UPK3BL2E5RIL1 263 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 SYNCRIPO60506 623 aaKnown RBP13.74□□□□□ -0.21
SPG7-221ENST00000569720 SMC2O95347 1197 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 PROS1P07225 676 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 GNSP15586 552 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 RDXP35241 583 aaKnown RBP13.74□□□□□ -0.21
SPG7-221ENST00000569720 MFAP3P55082 362 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 FKBP3Q00688 224 aaKnown RBP13.74□□□□□ -0.21
SPG7-221ENST00000569720 ARID5AQ03989 594 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 PNOCQ13519 176 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 CUL2Q13617 745 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 GOLGA7BQ2TAP0 167 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 WDR45BQ5MNZ6 344 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 ZNF658Q5TYW1 1059 aaPredicted RBP13.74□□□□□ -0.21
SPG7-221ENST00000569720 ANKS1BQ7Z6G8 1248 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 METTL3Q86U44 580 aaKnown RBP13.74□□□□□ -0.21
SPG7-221ENST00000569720 SLC41A1Q8IVJ1 513 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 CPXM2Q8N436 756 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 DDI1Q8WTU0 396 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 RNF139Q8WU17 664 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 GSDMAQ96QA5 445 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 ARID3AQ99856 593 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 SLC2A11Q9BYW1 496 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 PRDM16Q9HAZ2 1276 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 CAPN10Q9HC96 672 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 GDPD2Q9HCC8 539 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 THAP10Q9P2Z0 257 aaPredicted RBP13.74□□□□□ -0.21
SPG7-221ENST00000569720 TSPAN16Q9UKR8 245 aa13.74□□□□□ -0.21
SPG7-221ENST00000569720 PCDH15Q96QU1 1955 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 ARHGAP33O14559 1287 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 XPO1O14980 1071 aaKnown RBP13.73□□□□□ -0.21
SPG7-221ENST00000569720 CD19P15391 556 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 CD6P30203 668 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 PRCPP42785 496 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 HARS2P49590 506 aaKnown RBP13.73□□□□□ -0.21
SPG7-221ENST00000569720 PDE4CQ08493 712 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 BST2Q10589 180 aaKnown RBP13.73□□□□□ -0.21
SPG7-221ENST00000569720 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 EIF4HQ15056 248 aaKnown RBP13.73□□□□□ -0.21
SPG7-221ENST00000569720 GEN1Q17RS7 908 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 CBWD6Q4V339 395 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 COBLL1Q53SF7 1204 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 CBWD3Q5JTY5 395 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 CBWD5Q5RIA9 395 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 PM20D1Q6GTS8 502 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 UNQ6494/PRO21346Q6UXR6 183 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 MINDY1Q8N5J2 469 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 ZNF419Q96HQ0 510 aaPredicted RBP13.73□□□□□ -0.21
SPG7-221ENST00000569720 ULBP1Q9BZM6 244 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 SLC6A17Q9H1V8 727 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 ELOVL2Q9NXB9 296 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 ARMCX3Q9UH62 379 aaPredicted RBP13.73□□□□□ -0.21
SPG7-221ENST00000569720 KIAA1257Q9ULG3 409 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 COQ4Q9Y3A0 265 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 CACNA1EQ15878 2313 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 CKAP5Q14008 2032 aa13.73□□□□□ -0.21
SPG7-221ENST00000569720 MEI4A8MW99 385 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 TIMM44O43615 452 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 ACADMP11310 421 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 VDRP11473 427 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
SPG7-221ENST00000569720 OXTRP30559 389 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 IL12RB1P42701 662 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 ZNF445P59923 1031 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 LRRC63Q05C16 580 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 STIM1Q13586 685 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
SPG7-221ENST00000569720 PLEKHG6Q3KR16 790 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 FUT11Q495W5 492 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 MPPE1Q53F39 396 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 PIP4P1Q86T03 277 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 FMNL3Q8IVF7 1028 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 SIX6OS1Q8N1H7 587 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 SMARCE1Q969G3 411 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 SIPA1Q96FS4 1042 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 PIWIL1Q96J94 861 aaKnown RBP13.72□□□□□ -0.21
SPG7-221ENST00000569720 ANP32EQ9BTT0 268 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 SCNM1Q9BWG6 230 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 CIPCQ9C0C6 399 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 FSCN3Q9NQT6 498 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 ITM2CQ9NQX7 267 aa13.72□□□□□ -0.21
SPG7-221ENST00000569720 HBS1LQ9Y450 684 aaKnown RBP13.72□□□□□ -0.21
SPG7-221ENST00000569720 CHD6Q8TD26 2715 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms