RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
CDH3-208ENST00000569036 BHMTQ93088 406 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 P2RY11Q96G91 374 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
CDH3-208ENST00000569036 ASB7Q9H672 318 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 EBF2Q9HAK2 575 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 AASDHPPTQ9NRN7 309 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 WDR70Q9NW82 654 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 GEMIN8Q9NWZ8 242 aaKnown RBP11.88□□□□□ -0.51
CDH3-208ENST00000569036 FBXO10Q9UK96 956 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 KIAA1024Q9UPX6 916 aa11.88□□□□□ -0.51
CDH3-208ENST00000569036 MED13Q9UHV7 2174 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 A0A0B4J269 797 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 A0A1B0GVM2 712 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 F8VP50 259 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 GABRDO14764 452 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 WNT9AO14904 365 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 HNRNPDLO14979 420 aaKnown RBP11.87□□□□□ -0.51
CDH3-208ENST00000569036 LZTS3O60299 673 aaPredicted RBP11.87□□□□□ -0.51
CDH3-208ENST00000569036 C7P10643 843 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 XBP1P17861 261 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 CD38P28907 300 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 KRT2P35908 639 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 PNPLA4P41247 253 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 MFAP3P55082 362 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 NXPH1P58417 271 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 IFRD2Q12894 506 aaPredicted RBP11.87□□□□□ -0.51
CDH3-208ENST00000569036 ZNF211Q13398 564 aaPredicted RBP11.87□□□□□ -0.51
CDH3-208ENST00000569036 CLCA4Q14CN2 919 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 ISXQ2M1V0 245 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 TDRD10Q5VZ19 366 aaKnown RBP11.87□□□□□ -0.51
CDH3-208ENST00000569036 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 HTR3DQ70Z44 454 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 TICAM1Q8IUC6 712 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 OXR1Q8N573 874 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 MSTO1Q9BUK6 570 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 CCSER2Q9H7U1 834 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 ERVMER34-1Q9H9K5 563 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 CRTAC1Q9NQ79 661 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 DDX19AQ9NUU7 478 aaKnown RBP11.87□□□□□ -0.51
CDH3-208ENST00000569036 PLK2Q9NYY3 685 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 PLAAQ9Y263 795 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 SLC27A6Q9Y2P4 619 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 PCDHGA8Q9Y5G5 932 aa11.87□□□□□ -0.51
CDH3-208ENST00000569036 SDC3O75056 442 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 PLS3P13797 630 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 MSNP26038 577 aaKnown RBP11.86□□□□□ -0.51
CDH3-208ENST00000569036 LHX1P48742 406 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
CDH3-208ENST00000569036 SMTNP53814 917 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 CYP27A1Q02318 531 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 CAMK2GQ13555 558 aaPredicted RBP11.86□□□□□ -0.51
CDH3-208ENST00000569036 HECTD3Q5T447 861 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
CDH3-208ENST00000569036 SERPINA13PQ6UXR4 307 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 C1orf186Q6ZWK4 172 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 RBBP8NLQ8NC74 664 aaPredicted RBP11.86□□□□□ -0.51
CDH3-208ENST00000569036 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 HPS3Q969F9 1004 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 ATXN7L3BQ96GX2 97 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 C8orf48Q96LL4 319 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 SYT15Q9BQS2 421 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 SGK2Q9HBY8 427 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 TMPRSS4Q9NRS4 437 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 TMEM30AQ9NV96 361 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 SNX14Q9Y5W7 946 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 PDZD2O15018 2839 aa11.86□□□□□ -0.51
CDH3-208ENST00000569036 E9PMD0 336 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 TLR4O00206 839 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 ZNF500O60304 480 aaPredicted RBP11.85□□□□□ -0.51
CDH3-208ENST00000569036 PIGRP01833 764 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 POLR2BP30876 1174 aaKnown RBP11.85□□□□□ -0.51
CDH3-208ENST00000569036 MCM7P33993 719 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 ACOT2P49753 483 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 TUBP50607 506 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 CACNA2D1P54289 1103 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 RPS14P62263 151 aaKnown RBP11.85□□□□□ -0.51
CDH3-208ENST00000569036 TOB2Q14106 344 aaPredicted RBP11.85□□□□□ -0.51
CDH3-208ENST00000569036 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
CDH3-208ENST00000569036 OVCA2Q8WZ82 227 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 FUCA2Q9BTY2 467 aa11.85□□□□□ -0.51
CDH3-208ENST00000569036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH3-208ENST00000569036 FAM47DPA6NHR8 397 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 DTNBO60941 627 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 OR52Z1P0C646 297 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 CKMT1AP12532 417 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 GUCY2CP25092 1073 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 YWHAQP27348 245 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 ZBTB16Q05516 673 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 RAD51AP2Q09MP3 1159 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 STK3Q13188 491 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 SCARA3Q6AZY7 606 aa11.84□□□□□ -0.51
CDH3-208ENST00000569036 SLC39A4Q6P5W5 647 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms