RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SYNJ2BP-COX16A0A087WUM0 186 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 SLC12A8A0AV02 714 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 C2CD4BA6NLJ0 364 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 SIGLEC16A6NMB1 481 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 IRAK2O43187 625 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 TRUB2O95900 331 aaKnown RBP11.96□□□□□ -0.49
KARS-207ENST00000566560 CYP1A2P05177 515 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 GPD1P21695 349 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 SDC4P31431 198 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 NOS2P35228 1153 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 VIPR2P41587 438 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 RPL7AP62424 266 aaKnown RBP11.96□□□□□ -0.49
KARS-207ENST00000566560 GPC5P78333 572 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 PITX1P78337 314 aaPredicted RBP11.96□□□□□ -0.49
KARS-207ENST00000566560 HTR4Q13639 388 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 OTUD1Q5VV17 481 aaPredicted RBP11.96□□□□□ -0.49
KARS-207ENST00000566560 PARM1Q6UWI2 310 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 DDX42Q86XP3 938 aaKnown RBP eCLIP11.96□□□□□ -0.49
KARS-207ENST00000566560 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.96□□□□□ -0.49
KARS-207ENST00000566560 ZDHHC14Q8IZN3 488 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 CELF5Q8N6W0 485 aaKnown RBP11.96□□□□□ -0.49
KARS-207ENST00000566560 SH3RF2Q8TEC5 729 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 FGF14Q92915 247 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 CFAP57Q96MR6 1250 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 TRPV4Q9HBA0 871 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 MRPL47Q9HD33 250 aaKnown RBP11.96□□□□□ -0.49
KARS-207ENST00000566560 DDIT4Q9NX09 232 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 RRN3Q9NYV6 651 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 COX16Q9P0S2 106 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 CTTNBP2NLQ9P2B4 639 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 CFAP97Q9P2B7 532 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 INTUQ9ULD6 942 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 PCDHA13Q9Y5I0 950 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 NUMBLQ9Y6R0 609 aa11.96□□□□□ -0.49
KARS-207ENST00000566560 XIRP2A4UGR9 3374 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 COL6A3P12111 3177 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 HEPACAM2A8MVW5 462 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 LOC730098B7Z3J9 87 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 ANHXE9PGG2 379 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 LEFTY2O00292 366 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 IGLV3-25P01717 112 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 HMBSP08397 361 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 PDGFRAP16234 1089 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 DESP17661 470 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 PSMA2P25787 234 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 RFC1P35251 1148 aaPredicted RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 MAGEA1P43355 309 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 TBX4P57082 545 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 KRT83P78385 493 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 NME3Q13232 169 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 NNTQ13423 1086 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 TRIP4Q15650 581 aaPredicted RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 ZNF77Q15935 545 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 CDO1Q16878 200 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 SLC25A52Q3SY17 297 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 KIAA1328Q86T90 577 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 RIN3Q8TB24 985 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 ZNF564Q8TBZ8 553 aaPredicted RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 RFFLQ8WZ73 363 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 E2F7Q96AV8 911 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 ELSPBP1Q96BH3 223 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 PLD4Q96BZ4 506 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 RSPRY1Q96DX4 576 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 PPP1R9BQ96SB3 815 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 TBCBQ99426 244 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 NPY6RQ99463 290 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 DDX23Q9BUQ8 820 aaKnown RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 KLF16Q9BXK1 252 aaPredicted RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 OBP2AQ9NY56 170 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 ANAPC7Q9UJX3 599 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 LSM7Q9UK45 103 aaKnown RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 REXO2Q9Y3B8 237 aaKnown RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 SH3BP1Q9Y3L3 701 aa11.95□□□□□ -0.5
KARS-207ENST00000566560 HBS1LQ9Y450 684 aaKnown RBP11.95□□□□□ -0.5
KARS-207ENST00000566560 COL4A3Q01955 1670 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 M0QYT0 321 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 SCAMP3O14828 347 aaKnown RBP11.94□□□□□ -0.5
KARS-207ENST00000566560 CCP110O43303 1012 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 ECI2O75521 394 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 STC2O76061 302 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 APOEP02649 317 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 BMP1P13497 986 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TCF3P15923 654 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 TFE3P19532 575 aaPredicted RBP11.94□□□□□ -0.5
KARS-207ENST00000566560 GBP1P32455 592 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 RDXP35241 583 aaKnown RBP11.94□□□□□ -0.5
KARS-207ENST00000566560 PTPN9P43378 593 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 KPNA1P52294 538 aaPredicted RBP11.94□□□□□ -0.5
KARS-207ENST00000566560 VAV2P52735 878 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 ZNF143P52747 638 aaPredicted RBP11.94□□□□□ -0.5
KARS-207ENST00000566560 COG7P83436 770 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 ZXDBP98169 803 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 ATP11AP98196 1134 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 OGDHQ02218 1023 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 DEUP1Q05D60 604 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 GRM2Q14416 872 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
KARS-207ENST00000566560 TANGO2Q6ICL3 276 aa11.94□□□□□ -0.5
KARS-207ENST00000566560 VITQ6UXI7 678 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms