RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 RAB41Q5JT25 222 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 SYCP2LQ5T4T6 812 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 PEAR1Q5VY43 1037 aaPredicted RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 KIAA1211LQ6NV74 962 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 KIAA1324Q6UXG2 1013 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 DENND1CQ8IV53 801 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 GSDMAQ96QA5 445 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 GTPBP2Q9BX10 602 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 GTPBP4Q9BZE4 634 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 LRRC4Q9HBW1 653 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 OLA1Q9NTK5 396 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 FBXO10Q9UK96 956 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 AGO1Q9UL18 857 aaKnown RBP12.51□□□□□ -0.41
UBR1-206ENST00000566493 SLC27A6Q9Y2P4 619 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 STON1Q9Y6Q2 735 aa12.51□□□□□ -0.41
UBR1-206ENST00000566493 CNOT1A5YKK6 2376 aaKnown RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 XPO1O14980 1071 aaKnown RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 SYNCRIPO60506 623 aaKnown RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 PENKP01210 267 aaPredicted RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 SYPP08247 313 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 SERPINF2P08697 491 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 CD19P15391 556 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 ZNF132P52740 706 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 BCAT1P54687 386 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 MFAP3P55082 362 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 ARID5AQ03989 594 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 STIM1Q13586 685 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 CUL2Q13617 745 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 COBLL1Q53SF7 1204 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 FYB2Q5VWT5 728 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 ANKS1BQ7Z6G8 1248 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 RGL4Q8IZJ4 473 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 FMR1NBQ8N0W7 255 aaPredicted RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 DEFB124Q8NES8 71 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 DDI1Q8WTU0 396 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 RNF139Q8WU17 664 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 SMARCE1Q969G3 411 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 PLD4Q96BZ4 506 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 MRGPRX1Q96LB2 322 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 HSPA12BQ96MM6 686 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 IPO9Q96P70 1041 aaKnown RBP12.5□□□□□ -0.41
UBR1-206ENST00000566493 ULBP1Q9BZM6 244 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 PRDM16Q9HAZ2 1276 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 TSPAN16Q9UKR8 245 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 KIAA1257Q9ULG3 409 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 PI4KAP42356 2102 aa12.5□□□□□ -0.41
UBR1-206ENST00000566493 ADAMTS9Q9P2N4 1935 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 WASH3PC4AMC7 463 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 VDRP11473 427 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 GNSP15586 552 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 TBXAS1P24557 533 aaPredicted RBP12.49□□□□□ -0.41
UBR1-206ENST00000566493 HARS2P49590 506 aaKnown RBP12.49□□□□□ -0.41
UBR1-206ENST00000566493 LRRC63Q05C16 580 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 PDE4CQ08493 712 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 BST2Q10589 180 aaKnown RBP12.49□□□□□ -0.41
UBR1-206ENST00000566493 GEN1Q17RS7 908 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 ANKRD40Q6AI12 368 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 PM20D1Q6GTS8 502 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 SIX6OS1Q8N1H7 587 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 CPXM2Q8N436 756 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 FOXJ1Q92949 421 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 SLC2A11Q9BYW1 496 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 SLC6A17Q9H1V8 727 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 CD248Q9HCU0 757 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 THAP10Q9P2Z0 257 aaPredicted RBP12.49□□□□□ -0.41
UBR1-206ENST00000566493 SUSD2Q9UGT4 822 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
UBR1-206ENST00000566493 TPRP12270 2363 aaKnown RBP12.49□□□□□ -0.41
UBR1-206ENST00000566493 ACACBO00763 2458 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 ARHGAP33O14559 1287 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 PSMA7O14818 248 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 TIMM44O43615 452 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 OPHN1O60890 802 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 SETSIPP0DME0 302 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 CD6P30203 668 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 OXTRP30559 389 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 IL12RB1P42701 662 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 ADIGQ0VDE8 80 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 LRMPQ12912 555 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 BECN1Q14457 450 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 EIF4HQ15056 248 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 PLEKHG6Q3KR16 790 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 FUT11Q495W5 492 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 MPPE1Q53F39 396 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 WDR45BQ5MNZ6 344 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 METTL3Q86U44 580 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 FMNL3Q8IVF7 1028 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 SLC41A1Q8IVJ1 513 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 ZC3H3Q8IXZ2 948 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 UBA3Q8TBC4 463 aa12.48□□□□□ -0.41
UBR1-206ENST00000566493 NDRG1Q92597 394 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 ZNF419Q96HQ0 510 aaPredicted RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 PIWIL1Q96J94 861 aaKnown RBP12.48□□□□□ -0.41
UBR1-206ENST00000566493 CIPCQ9C0C6 399 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms