RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SDE2Q6IQ49 451 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 LCLAT1Q6UWP7 414 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 FMNL3Q8IVF7 1028 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 FAM217AQ8IXS0 508 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 CPXM2Q8N436 756 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 KCTD13Q8WZ19 329 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 PLD4Q96BZ4 506 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 KIAA1257Q9ULG3 409 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 CTNND2Q9UQB3 1225 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 PCDHB4Q9Y5E5 795 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 EPG5Q9HCE0 2579 aa19.17■□□□□ 0.66
USB1-213ENST00000566292 GFRA2O00451 464 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 BIN1O00499 593 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 CDX4O14627 284 aaPredicted RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 CALCAP01258 141 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 SETSIPP0DME0 302 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 SPDYCQ5MJ68 293 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 N4BP2L1Q5TBK1 243 aaPredicted RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 BSPRYQ5W0U4 402 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 FOXR2Q6PJQ5 311 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 ARHGEF19Q8IW93 802 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 PPM1KQ8N3J5 372 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 EDEM1Q92611 657 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 PIWIL1Q96J94 861 aaKnown RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 IPO9Q96P70 1041 aaKnown RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 SLC6A17Q9H1V8 727 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 CD93Q9NPY3 652 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 OLA1Q9NTK5 396 aaKnown RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 SFMBT1Q9UHJ3 866 aa19.16■□□□□ 0.66
USB1-213ENST00000566292 EVLQ9UI08 416 aaPredicted RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 ATXN2Q99700 1313 aaKnown RBP19.16■□□□□ 0.66
USB1-213ENST00000566292 IGHV1OR15-9A0A0B4J2B8 117 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 P4HA2O15460 535 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 KCNK5O95279 499 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 LCP1P13796 627 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 ITPKAP23677 461 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 BRD2P25440 801 aaKnown RBP19.15■□□□□ 0.66
USB1-213ENST00000566292 STX17P56962 302 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 DAOAP59103 153 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 RPL6Q02878 288 aaKnown RBP19.15■□□□□ 0.66
USB1-213ENST00000566292 TRIM61Q5EBN2 209 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 LYSMD4Q5XG99 296 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 PMF1Q6P1K2 205 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 SYT12Q8IV01 421 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 SIX6OS1Q8N1H7 587 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 SCML4Q8N228 414 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 DEFB119Q8N690 84 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 SLC35F5Q8WV83 523 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 TMEM9BQ9NQ34 198 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 CNGB3Q9NQW8 809 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 CYP8B1Q9UNU6 501 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.15■□□□□ 0.66
USB1-213ENST00000566292 STON1Q9Y6Q2 735 aa19.15■□□□□ 0.66
USB1-213ENST00000566292 MAP1BP46821 2468 aaKnown RBP19.15■□□□□ 0.66
USB1-213ENST00000566292 PCDH15Q96QU1 1955 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 BICDL2A1A5D9 508 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 PIK3R2O00459 728 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 AP5Z1O43299 807 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 CYBBP04839 570 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 IL12RB1P42701 662 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 RGS7P49802 495 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 CNGA2Q16280 664 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 PEAR1Q5VY43 1037 aaPredicted RBP19.14■□□□□ 0.65
USB1-213ENST00000566292 SLC36A4Q6YBV0 504 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 RRAGAQ7L523 313 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 TRIM59Q8IWR1 403 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 RBBP8NLQ8NC74 664 aaPredicted RBP19.14■□□□□ 0.65
USB1-213ENST00000566292 RNF139Q8WU17 664 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 MRGPRX1Q96LB2 322 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 ABCC13Q9NSE7 274 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 THAP10Q9P2Z0 257 aaPredicted RBP19.14■□□□□ 0.65
USB1-213ENST00000566292 PILRBQ9UKJ0 227 aa19.14■□□□□ 0.65
USB1-213ENST00000566292 HBS1LQ9Y450 684 aaKnown RBP19.14■□□□□ 0.65
USB1-213ENST00000566292 MUC22E2RYF6 1773 aaPredicted RBP19.14■□□□□ 0.65
USB1-213ENST00000566292 M0QYV0 167 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 ZBTB24O43167 697 aaPredicted RBP19.13■□□□□ 0.65
USB1-213ENST00000566292 MSI1O43347 362 aaKnown RBP19.13■□□□□ 0.65
USB1-213ENST00000566292 ZNF217O75362 1048 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 HOXD9P28356 352 aaPredicted RBP19.13■□□□□ 0.65
USB1-213ENST00000566292 ZNF132P52740 706 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 MARSP56192 900 aaKnown RBP19.13■□□□□ 0.65
USB1-213ENST00000566292 KCNH2Q12809 1159 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 ENPP2Q13822 863 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 TMEM215Q68D42 235 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 PSAPL1Q6NUJ1 521 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 ANKS1BQ7Z6G8 1248 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 SLC41A1Q8IVJ1 513 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 EHBP1Q8NDI1 1231 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 DDI1Q8WTU0 396 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 KREMEN1Q96MU8 473 aa19.13■□□□□ 0.65
USB1-213ENST00000566292 KMT2BQ9UMN6 2715 aaPredicted RBP19.13■□□□□ 0.65
USB1-213ENST00000566292 TSPAN3O60637 253 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 PMLP29590 882 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 HARS2P49590 506 aaKnown RBP19.12■□□□□ 0.65
USB1-213ENST00000566292 GCNT1Q02742 428 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 CETN1Q12798 172 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 PAK1Q13153 545 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 FUT11Q495W5 492 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 DAB2IPQ5VWQ8 1189 aa19.12■□□□□ 0.65
USB1-213ENST00000566292 MSANTD2Q6P1R3 559 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms