RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 PARD6AQ9NPB6 346 aa5.62□□□□□ -1.51
CNOT1-209ENST00000566240 TBCCD1Q9NVR7 557 aa5.62□□□□□ -1.51
CNOT1-209ENST00000566240 RAPGEFL1Q9UHV5 662 aa5.62□□□□□ -1.51
CNOT1-209ENST00000566240 TRPC5Q9UL62 973 aaPredicted RBP5.62□□□□□ -1.51
CNOT1-209ENST00000566240 SLC12A4Q9UP95 1085 aa5.62□□□□□ -1.51
CNOT1-209ENST00000566240 SH2B3Q9UQQ2 575 aa5.62□□□□□ -1.51
CNOT1-209ENST00000566240 TCAF1Q9Y4C2 921 aa5.62□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3DA0A087WVF3 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3IA0A087WXS9 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3EA0A087X179 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3KA0A087X1G2 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 A0A1W2PPH5 198 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3BA6NDS4 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3FA6NER0 549 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 AGAP5A6NIR3 686 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 MBD3L5A6NJ08 208 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TMEM200CA6NKL6 621 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3LB9A6J9 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 F5H0A9 414 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 HNRNPRO43390 633 aaKnown RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 PROM1O43490 865 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 CA12O43570 354 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 RTN3O95197 1032 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 ONECUT2O95948 504 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3HP0C7X1 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 NR4A1P22736 598 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 MCM5P33992 734 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 PSMC2P35998 433 aaKnown RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 GUCY1B3Q02153 619 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 DNASE1L3Q13609 305 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TP53BP2Q13625 1128 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 KCTD2Q14681 263 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 CBWD5Q5RIA9 395 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3GQ6DHY5 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3CQ6IPX1 549 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 ZNF585AQ6P3V2 769 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 DPY19L3Q6ZPD9 716 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 TBC1D3Q8IZP1 549 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 LNX2Q8N448 690 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 PTGR2Q8N8N7 351 aaPredicted RBP5.61□□□□□ -1.51
CNOT1-209ENST00000566240 CCDC89Q8N998 374 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 RNF125Q96EQ8 232 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 PGBD1Q96JS3 809 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 ADGRA2Q96PE1 1338 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 PIGSQ96S52 555 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 ALG8Q9BVK2 526 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 KLC2Q9H0B6 622 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 KLC4Q9NSK0 619 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 DKK3Q9UBP4 350 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 NRBP1Q9UHY1 535 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 ASAP1Q9ULH1 1129 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 HSF4Q9ULV5 492 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 RCE1Q9Y256 329 aa5.61□□□□□ -1.51
CNOT1-209ENST00000566240 VWC2LB2RUY7 222 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 CSF1P09603 554 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PEPDP12955 493 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 CHN1P15882 459 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 ADRA1DP25100 572 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 GRK5P34947 590 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 SELENOPP49908 381 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PDE1AP54750 535 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 SUMO2P61956 95 aaKnown RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 DCAF7P61962 342 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 SLC25A3Q00325 362 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 DEUP1Q05D60 604 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 GALNT2Q10471 571 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 CBFBQ13951 182 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 GPR68Q15743 365 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 CYP1B1Q16678 543 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 SLC45A4Q5BKX6 768 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 NAA35Q5VZE5 725 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 C16orf89Q6UX73 402 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 LRRC8DQ7L1W4 858 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 NGDNQ8NEJ9 315 aaKnown RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 TDRD7Q8NHU6 1098 aaKnown RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PRR11Q96HE9 360 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PPP1R10Q96QC0 940 aaKnown RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PRR25Q96S07 402 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 BARD1Q99728 777 aaKnown RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 CHCHD6Q9BRQ6 235 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PARPBPQ9NWS1 579 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 EHD3Q9NZN3 535 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 CEP72Q9P209 647 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 ORC3Q9UBD5 711 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-209ENST00000566240 MGAT4CQ9UBM8 478 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 ST6GALNAC2Q9UJ37 374 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 GABRQQ9UN88 632 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 PCDHB2Q9Y5E7 798 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 RPS6KL1Q9Y6S9 549 aa5.6□□□□□ -1.51
CNOT1-209ENST00000566240 AP4M1O00189 453 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 PLSCR1O15162 318 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 SPTLC2O15270 562 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 YY2O15391 372 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 ANP32CO43423 234 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 LPXNO60711 386 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 CYP3A4P08684 503 aa5.59□□□□□ -1.51
CNOT1-209ENST00000566240 ZNF37AP17032 561 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-209ENST00000566240 ABCD3P28288 659 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms