RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 TLR6Q9Y2C9 796 aa15.41■□□□□ 0.06
SPG7-213ENST00000566221 PAXBP1Q9Y5B6 917 aa15.41■□□□□ 0.06
SPG7-213ENST00000566221 XIRP2A4UGR9 3374 aa15.41■□□□□ 0.06
SPG7-213ENST00000566221 DOCK4Q8N1I0 1966 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 SYNJ2BP-COX16A0A087WUM0 186 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 SLC12A8A0AV02 714 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 KIF2AO00139 706 aaPredicted RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 BUB1BO60566 1050 aaPredicted RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 ENDOD1O94919 500 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 GBP2P32456 591 aaPredicted RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 RING1Q06587 406 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 MESDQ14696 234 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 OTOP3Q7RTS5 596 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 REXO1L1PQ8IX06 675 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 ZSCAN18Q8TBC5 510 aaPredicted RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 PLD4Q96BZ4 506 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 ZFRQ96KR1 1074 aaKnown RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 CYP2S1Q96SQ9 504 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 KLF16Q9BXK1 252 aaPredicted RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 ADAM33Q9BZ11 813 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 PIGVQ9NUD9 493 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
SPG7-213ENST00000566221 COX16Q9P0S2 106 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 CPQQ9Y646 472 aa15.4■□□□□ 0.06
SPG7-213ENST00000566221 TMEM110-MUSTN1A8MSY1 372 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 MOCS3O95396 460 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 IGLV3-27P01718 113 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 APOEP02649 317 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 SLC2A3P11169 496 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 CCR1P32246 355 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 PCK1P35558 622 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 SLC1A1P43005 524 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 HDAC4P56524 1084 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 TBX4P57082 545 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 USP4Q13107 963 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 EIF4EBP2Q13542 120 aaPredicted RBP15.39■□□□□ 0.05
SPG7-213ENST00000566221 PPP2R5DQ14738 602 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 BRMS1LQ5PSV4 323 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 SH3PXD2AQ5TCZ1 1133 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 NUGGCQ68CJ6 796 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 DAAM2Q86T65 1068 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 SYCE1Q8N0S2 351 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 SMARCD2Q92925 531 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 RNF34Q969K3 372 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 ACSF2Q96CM8 615 aaPredicted RBP15.39■□□□□ 0.05
SPG7-213ENST00000566221 ZSWIM3Q96MP5 696 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 ASB16Q96NS5 453 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 NECAB3Q96P71 396 aaPredicted RBP15.39■□□□□ 0.05
SPG7-213ENST00000566221 ALS2CR12Q96Q35 445 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 MYADMQ96S97 322 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 TDP1Q9NUW8 608 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 SMPD4Q9NXE4 827 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 CALCOCO1Q9P1Z2 691 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 USTQ9Y2C2 406 aa15.39■□□□□ 0.05
SPG7-213ENST00000566221 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 USP27XA6NNY8 438 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 LRCH4O75427 683 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 PRAMEF12O95522 483 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 TCF3P15923 654 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 CXCR3P49682 368 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 MTA1Q13330 715 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 SMAD2Q15796 467 aaKnown RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 FAM78AQ5JUQ0 283 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 PTCRAQ6ISU1 281 aaPredicted RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 ARID3BQ8IVW6 561 aaPredicted RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 UNC45BQ8IWX7 931 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 CELF5Q8N6W0 485 aaKnown RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 LRRC57Q8N9N7 239 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 TDRD5Q8NAT2 981 aaKnown RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 USP13Q92995 863 aaPredicted RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 SLC39A13Q96H72 371 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 FCRL2Q96LA5 508 aaPredicted RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 PHF7Q9BWX1 381 aaPredicted RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 DCLK3Q9C098 648 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 SMG9Q9H0W8 520 aaKnown RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 TRPV4Q9HBA0 871 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.38■□□□□ 0.05
SPG7-213ENST00000566221 LSM7Q9UK45 103 aaKnown RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 ARIH1Q9Y4X5 557 aaPredicted RBP15.38■□□□□ 0.05
SPG7-213ENST00000566221 CAPN6Q9Y6Q1 641 aa15.38■□□□□ 0.05
SPG7-213ENST00000566221 LEFTY2O00292 366 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 SPOPO43791 374 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 PRPSAP2O60256 369 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 PALMO75781 387 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 STC2O76061 302 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 HMBSP08397 361 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 IRF1P10914 325 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 LAMP2P13473 410 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 MIPP30301 263 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 HARS2P49590 506 aaKnown RBP15.37■□□□□ 0.05
SPG7-213ENST00000566221 AIF1P55008 147 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 HADHQ16836 314 aaKnown RBP15.37■□□□□ 0.05
SPG7-213ENST00000566221 AAK1Q2M2I8 961 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 ZC3H12AQ5D1E8 599 aaKnown RBP15.37■□□□□ 0.05
SPG7-213ENST00000566221 CC2D1AQ6P1N0 951 aaPredicted RBP15.37■□□□□ 0.05
SPG7-213ENST00000566221 POTEHQ6S545 545 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 MTSS1LQ765P7 747 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 FAM131BQ86XD5 332 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
SPG7-213ENST00000566221 SH3RF2Q8TEC5 729 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms