RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SMPD4Q9NXE4 827 aa8.1□□□□□ -1.11
CDH1-208ENST00000565810 PCSK1NQ9UHG2 260 aa8.1□□□□□ -1.11
CDH1-208ENST00000565810 USP18Q9UMW8 372 aa8.1□□□□□ -1.11
CDH1-208ENST00000565810 ARHGAP26Q9UNA1 814 aa8.1□□□□□ -1.11
CDH1-208ENST00000565810 ZNF510Q9Y2H8 683 aa8.1□□□□□ -1.11
CDH1-208ENST00000565810 USP15Q9Y4E8 981 aaPredicted RBP8.1□□□□□ -1.11
CDH1-208ENST00000565810 XIRP2A4UGR9 3374 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 USP27XA6NNY8 438 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 MSI1O43347 362 aaKnown RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 MBTPS2O43462 519 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 LRCH4O75427 683 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 MOCS2O96007 188 aaPredicted RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 TUBB4AP04350 444 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 IRF1P10914 325 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 TNNT1P13805 278 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 TFE3P19532 575 aaPredicted RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 SLC11A2P49281 568 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 CXCR3P49682 368 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 ATXN1P54253 815 aaKnown RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 HDAC4P56524 1084 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 GNG11P61952 73 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 PITX1P78337 314 aaPredicted RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 RING1Q06587 406 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 RPS6KA1Q15418 735 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 LEXMQ3ZCV2 418 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 STXBP5Q5T5C0 1151 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 ERMARDQ5T6L9 678 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 SH3PXD2AQ5TCZ1 1133 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 BNIPLQ7Z465 357 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 SLFN11Q7Z7L1 901 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 ARID3BQ8IVW6 561 aaPredicted RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 CELF5Q8N6W0 485 aaKnown RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 ZSCAN18Q8TBC5 510 aaPredicted RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 SMARCD2Q92925 531 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 NTAN1Q96AB6 310 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 E2F7Q96AV8 911 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 SLC39A13Q96H72 371 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 ZSWIM3Q96MP5 696 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 SLC22A12Q96S37 553 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 DDX50Q9BQ39 737 aaKnown RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 KLF16Q9BXK1 252 aaPredicted RBP8.09□□□□□ -1.11
CDH1-208ENST00000565810 TKTL2Q9H0I9 626 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 POMKQ9H5K3 350 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 ZWILCHQ9H900 591 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 ZFP14Q9HCL3 533 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 GKN1Q9NS71 199 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 PIGVQ9NUD9 493 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 TDP1Q9NUW8 608 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 CDH22Q9UJ99 828 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 NR2E1Q9Y466 385 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 JRKLQ9Y4A0 524 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 HYOU1Q9Y4L1 999 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 CAPN6Q9Y6Q1 641 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 MYO9BQ13459 2157 aa8.09□□□□□ -1.11
CDH1-208ENST00000565810 PRRC2BQ5JSZ5 2229 aaKnown RBP8.09□□□□□ -1.12
CDH1-208ENST00000565810 TRANK1O15050 2925 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 CCDC66A2RUB6 948 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 GRXCR2A6NFK2 248 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 KCNU1A8MYU2 1149 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 MIF4GDA9UHW6 222 aaKnown RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 KIF2AO00139 706 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 LEFTY2O00292 366 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 SLC9A3R1O14745 358 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 PSTPIP1O43586 416 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 STC2O76061 302 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 LATS1O95835 1130 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 FTCDO95954 541 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 LAMP2P13473 410 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 CORO1AP31146 461 aaKnown RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 ADRA1BP35368 520 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 GJC1P36383 396 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 CETN2P41208 172 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 ZNF252P-AS1Q0IIN9 211 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 EIF4EBP2Q13542 120 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 KRT81Q14533 505 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 AAK1Q2M2I8 961 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 LRRC38Q5VT99 294 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 OTUD1Q5VV17 481 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 PTCRAQ6ISU1 281 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 MTSS1LQ765P7 747 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 POLNQ7Z5Q5 900 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 NT5DC3Q86UY8 548 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 PSTKQ8IV42 348 aaKnown RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 DENND1CQ8IV53 801 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 MAP7D3Q8IWC1 876 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 YAF2Q8IY57 180 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 SLC35F6Q8N357 371 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 PLCD3Q8N3E9 789 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 C17orf53Q8N3J3 647 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 KIAA1958Q8N8K9 716 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 LRRC57Q8N9N7 239 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 TDRD5Q8NAT2 981 aaKnown RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 SH3RF2Q8TEC5 729 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 TEKT4Q8WW24 435 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 HSPH1Q92598 858 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 USP13Q92995 863 aaPredicted RBP8.08□□□□□ -1.12
CDH1-208ENST00000565810 AZIN2Q96A70 460 aa8.08□□□□□ -1.12
CDH1-208ENST00000565810 BTN2A3PQ96KV6 586 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms