RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	TMPRSS15	P98073	1019 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TPSAB1	Q15661	275 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	CHI3L2	Q15782	390 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	KYAT1	Q16773	422 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TRIM68	Q6AZZ1	485 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	GPR142	Q7Z601	462 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	ARID3B	Q8IVW6	561 aa	Predicted RBP	13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TRIM42	Q8IWZ5	723 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	VPS52	Q8N1B4	723 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	TEX9	Q8N6V9	391 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	NRG4	Q8WWG1	115 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	FAM49B	Q9NUQ9	324 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	MOCS1	Q9NZB8	636 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	GTF2IRD1	Q9UHL9	959 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	AKT3	Q9Y243	479 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZSWIM8	A7E2V4	1837 aa		13.61	□□□□□ -0.23
SCAPER-215	ENST00000565507		I3L4J1	428 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	PPEF2	O14830	753 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	LGALS2	P05162	132 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	GTF2A2	P52657	109 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	ATXN1	P54253	815 aa	Known RBP	13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	HUNK	P57058	714 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	TTLL4	Q14679	1199 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	RCN1	Q15293	331 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	MROH9	Q5TGP6	573 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	ATG16L1	Q676U5	607 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	C4orf22	Q6V702	233 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	NT5DC4	Q86YG4	428 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	ADGRF2	Q8IZF7	708 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	FBXO27	Q8NI29	283 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	NPLOC4	Q8TAT6	608 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	DNAJC9	Q8WXX5	260 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CENPI	Q92674	756 aa	Predicted RBP	13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	MCUR1	Q96AQ8	359 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	KIF12	Q96FN5	646 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZNF333	Q96JL9	665 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	KATNBL1	Q9H079	304 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	NMRK1	Q9NWW6	199 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	STOML1	Q9UBI4	398 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	TBX10	O75333	385 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	TOP3B	O95985	862 aa	Known RBP	13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	GSR	P00390	522 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SETSIP	P0DME0	302 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CDK18	Q07002	472 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SESTD1	Q86VW0	696 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	NUDCD3	Q8IVD9	361 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	NDUFAF2	Q8N183	169 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	MICAL1	Q8TDZ2	1067 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	PCMTD2	Q9NV79	361 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	PCDHA11	Q9Y5I1	949 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	MAD1L1	Q9Y6D9	718 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CCDC195	A0A1B0GUA6	201 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	BPGM	P07738	259 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	PTPN9	P43378	593 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	RAP1GDS1	P52306	607 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SEMA5A	Q13591	1074 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SNX30	Q5VWJ9	437 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	KCNT2	Q6UVM3	1135 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	TIFAB	Q6ZNK6	161 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CYS1	Q717R9	158 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CCDC33	Q8N5R6	958 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	RAB3IL1	Q8TBN0	382 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CLEC4C	Q8WTT0	213 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SPDL1	Q96EA4	605 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	LPIN3	Q9BQK8	851 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SNX9	Q9Y5X1	595 aa		13.6	□□□□□ -0.23
SCAPER-215	ENST00000565507	SCN1A	P35498	2009 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	EIF4E1B	A6NMX2	242 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	BIRC5	O15392	142 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	PSMG1	O95456	288 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	VHL	P40337	213 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	CPA2	P48052	419 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	NR2C2	P49116	596 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	DPP9	Q86TI2	863 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	STKLD1	Q8NE28	680 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	FAM136A	Q96C01	138 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZMAT2	Q96NC0	199 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZIC5	Q96T25	663 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	OSBPL1A	Q9BXW6	950 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZFAT	Q9P243	1243 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	NR2E3	Q9Y5X4	410 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507		B2RBV5	119 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	NVL	O15381	856 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	MAGEC1	O60732	1142 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	ALDH1A2	O94788	518 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	AQP5	P55064	265 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	SESN3	P58005	492 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	NBPF20	Q3BBV1	942 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	TMPRSS6	Q8IU80	811 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	ZDHHC17	Q8IUH5	632 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	UNC5B	Q8IZJ1	945 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	C2orf69	Q8N8R5	385 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	RBM15B	Q8NDT2	890 aa	Known RBP	13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	CSPG4P5	Q96PW8	444 aa		13.59	□□□□□ -0.23
SCAPER-215	ENST00000565507	DHX35	Q9H5Z1	703 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms