RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 UNQ6494/PRO21346Q6UXR6 183 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 DENND1CQ8IV53 801 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 FAM217AQ8IXS0 508 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 ZC3H3Q8IXZ2 948 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 CPXM2Q8N436 756 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 CCDC150Q8NCX0 1101 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 NDRG1Q92597 394 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 GATA6Q92908 595 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 CCDC47Q96A33 483 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 HSPA12BQ96MM6 686 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 SCNM1Q9BWG6 230 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 SCAND2PQ9GZW5 306 aaPredicted RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 FAM124BQ9H5Z6 455 aaPredicted RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 WSB2Q9NYS7 404 aaPredicted RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 MARCH2Q9P0N8 246 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 USP36Q9P275 1121 aaKnown RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 THAP10Q9P2Z0 257 aaPredicted RBP9□□□□□ -0.97
CAPN3-213ENST00000565173 RASAL2Q9UJF2 1139 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 ITPR1Q14643 2758 aa9□□□□□ -0.97
CAPN3-213ENST00000565173 IGF2RP11717 2491 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ARHGAP33O14559 1287 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 CETN3O15182 167 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ZBTB24O43167 697 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 GABBR2O75899 941 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ZBED1O96006 694 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 C7P10643 843 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 MAOBP27338 520 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 TKTL1P51854 596 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF132P52740 706 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 COPAP53621 1224 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 PMS1P54277 932 aaKnown RBP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 YWHAGP61981 247 aaKnown RBP eCLIP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 PNOCQ13519 176 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 TRIP4Q15650 581 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 COBLL1Q53SF7 1204 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ANKRD40Q6AI12 368 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 FMR1NBQ8N0W7 255 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ARHGAP18Q8N392 663 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 TTC39CQ8N584 583 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 MINDY1Q8N5J2 469 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 UBR7Q8N806 425 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 OR2I1PQ8NGU4 316 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 SPATA20Q8TB22 786 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 DNASE2BQ8WZ79 361 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 TOE1Q96GM8 510 aaKnown RBP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 GTPBP2Q9BX10 602 aaKnown RBP8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ADAM33Q9BZ11 813 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ULBP1Q9BZM6 244 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 DCLK3Q9C098 648 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 DNAI2Q9GZS0 605 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 SLC32A1Q9H598 525 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ITM2CQ9NQX7 267 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ELOVL2Q9NXB9 296 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 ZMIZ1Q9ULJ6 1067 aa8.99□□□□□ -0.97
CAPN3-213ENST00000565173 CACNA1EQ15878 2313 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 LOC400499M0QZD8 3231 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 SPAARA0A1B0GVQ0 90 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 SLC12A8A0AV02 714 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 FAM221BA6H8Z2 402 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 YJEFN3A6XGL0 299 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 E7ENQ6 273 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 XPO1O14980 1071 aaKnown RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 NPC1O15118 1278 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 HYAL3O43820 417 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 STX10O60499 249 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 IGLV3-19P01714 112 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 EPB41P11171 864 aaKnown RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 CD6P30203 668 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 TPMTP51580 245 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 ATXN3P54252 364 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 SIM1P81133 766 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 PDE4CQ08493 712 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 CUL2Q13617 745 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 ZNF234Q14588 700 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 PKDCCQ504Y2 493 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 RABEPKQ7Z6M1 372 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 KIAA0907Q7Z7F0 614 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 TMPRSS6Q8IU80 811 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 ENGASEQ8NFI3 743 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 CADM4Q8NFZ8 388 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 SORCS1Q8WY21 1168 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 PLD4Q96BZ4 506 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 SLC2A11Q9BYW1 496 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 PRDM16Q9HAZ2 1276 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 STOML2Q9UJZ1 356 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 RALYQ9UKM9 306 aaKnown RBP8.98□□□□□ -0.97
CAPN3-213ENST00000565173 TSPAN16Q9UKR8 245 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 NEUROG3Q9Y4Z2 214 aa8.98□□□□□ -0.97
CAPN3-213ENST00000565173 METTL12A8MUP2 240 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 O00370 1275 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SLC16A3O15427 465 aaKnown RBP8.97□□□□□ -0.97
CAPN3-213ENST00000565173 TIMM44O43615 452 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 OPHN1O60890 802 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 NDUFS2O75306 463 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 CAPNS1P04632 268 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 SYPP08247 313 aa8.97□□□□□ -0.97
CAPN3-213ENST00000565173 NCAM1P13591 858 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms