RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 PASD1Q8IV76 773 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF276Q8N554 614 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 MDGA1Q8NFP4 955 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 GOLGA1Q92805 767 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 FAM149B1Q96BN6 582 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 PLD4Q96BZ4 506 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 RMDN1Q96DB5 314 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 P2RY11Q96G91 374 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 ARRDC1-AS1Q9H2J1 176 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 NDST4Q9H3R1 872 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 POLMQ9NP87 494 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 MARK1Q9P0L2 795 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 AJAP1Q9UKB5 411 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF510Q9Y2H8 683 aa14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-204ENST00000565023 CCDC163A0A0D9SF12 145 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 TCRBV21S2A2A0A5A6 115 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 BECN2A8MW95 431 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 PRRT4C9JH25 899 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 ADAM23O75077 832 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 KRT37O76014 449 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 ALDH1A2O94788 518 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 LTFP02788 710 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 CYBBP04839 570 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 PNMA6AP0CW24 399 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 HOXB2P14652 356 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF18P17022 549 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 PON1P27169 355 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 CHKAP35790 457 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 HARS2P49590 506 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 RSPO4Q2I0M5 234 aaPredicted RBP14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 ZSCAN23Q3MJ62 389 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 SCUBE3Q8IX30 993 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 DDI1Q8WTU0 396 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF606Q8WXB4 792 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 RLN3Q8WXF3 142 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 ACOX2Q99424 681 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 HSD3B7Q9H2F3 369 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 SMOC1Q9H4F8 434 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 APEX2Q9UBZ4 518 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 DNAJC12Q9UKB3 198 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 CHD8Q9HCK8 2581 aa14.23□□□□□ -0.13
VPS9D1-204ENST00000565023 A0A0A0MRY4 1105 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 MED7O43513 233 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 NCAM1P13591 858 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 BCKDHBP21953 392 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 GPD2P43304 727 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 ZNF165P49910 485 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 KRT31Q15323 416 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 TRIP4Q15650 581 aaPredicted RBP14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 USP39Q53GS9 565 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 FYB2Q5VWT5 728 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 ENOSF1Q7L5Y1 443 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 CHPFQ8IZ52 775 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 AOPEPQ8N6M6 819 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 ADAM32Q8TC27 787 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 SEMA4GQ9NTN9 838 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 CACNA2D2Q9NY47 1150 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 TAB2Q9NYJ8 693 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 TJP2Q9UDY2 1190 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 CYTH4Q9UIA0 394 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 HCN2Q9UL51 889 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 CLEC4EQ9ULY5 219 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 CNTN6Q9UQ52 1028 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 HBS1LQ9Y450 684 aaKnown RBP14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 RAD54BQ9Y620 910 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 NUP205Q92621 2012 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 SPTBN2O15020 2390 aa14.22□□□□□ -0.13
VPS9D1-204ENST00000565023 E5RJQ4 531 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 CAPN9O14815 690 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 FBXO21O94952 628 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 CISD3P0C7P0 127 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 CHRM1P11229 460 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 TGM1P22735 817 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 NTSR1P30989 418 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 TBX4P57082 545 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 RAPGEF1Q13905 1077 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 SF3A2Q15428 464 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 ELF2Q15723 593 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 GEN1Q17RS7 908 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 PLK5Q496M5 336 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 HSF5Q4G112 596 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 SDE2Q6IQ49 451 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 ARMCX6Q7L4S7 300 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 TRMT11Q7Z4G4 463 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 RASSF3Q86WH2 238 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 DHX40Q8IX18 779 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 GPR161Q8N6U8 529 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 FRMD1Q8N878 549 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 IRGQQ8WZA9 623 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 LSM14BQ9BX40 385 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 DUSP15Q9H1R2 295 aaPredicted RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 SIX2Q9NPC8 291 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 EBF1Q9UH73 591 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 LIMA1Q9UHB6 759 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 NAALADL1Q9UQQ1 740 aa14.21□□□□□ -0.13
VPS9D1-204ENST00000565023 CEP192Q8TEP8 1941 aa14.21□□□□□ -0.14
VPS9D1-204ENST00000565023 MAP1BP46821 2468 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-204ENST00000565023 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms