RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 RRN3Q9NYV6 651 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 TLR6Q9Y2C9 796 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 HBS1LQ9Y450 684 aaKnown RBP12.99□□□□□ -0.33
KARS-204ENST00000564578 PCDHA13Q9Y5I0 950 aa12.99□□□□□ -0.33
KARS-204ENST00000564578 HELZP42694 1942 aaKnown RBP12.99□□□□□ -0.33
KARS-204ENST00000564578 E2F8A0AVK6 867 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 I6L893 689 aaPredicted RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 SLC34A2O95436 690 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 MAGEA1P43355 309 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 PTPN9P43378 593 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 ZNF143P52747 638 aaPredicted RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 ATP11AP98196 1134 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 RING1Q06587 406 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 NME3Q13232 169 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 DCUN1D2Q6PH85 259 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 ARFGAP1Q8N6T3 406 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 ACRBPQ8NEB7 543 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 CTNNBL1Q8WYA6 563 aaPredicted RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 NUP85Q9BW27 656 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 MRPL47Q9HD33 250 aaKnown RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 OSGEPQ9NPF4 335 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 ANLNQ9NQW6 1124 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 STAP1Q9ULZ2 295 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 SCINQ9Y6U3 715 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 SYNJ2BP-COX16A0A087WUM0 186 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 OTOL1A6NHN0 477 aaPredicted RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 GPD1P21695 349 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 SDC4P31431 198 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 SULT1E1P49888 294 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 HDAC4P56524 1084 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 TBX4P57082 545 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 TDGQ13569 410 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 SPA17Q15506 151 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 ZC3H12AQ5D1E8 599 aaKnown RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 TRIM68Q6AZZ1 485 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
KARS-204ENST00000564578 BBS7Q8IWZ6 715 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 ADGRG2Q8IZP9 1017 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 PIAS4Q8N2W9 510 aaPredicted RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 KIAA1958Q8N8K9 716 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 CCDC112Q8NEF3 446 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 FNIP1Q8TF40 1166 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 PPP1R9BQ96SB3 815 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 DESI2Q9BSY9 194 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 TRMT61BQ9BVS5 477 aaKnown RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 COX16Q9P0S2 106 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 XPO7Q9UIA9 1087 aaKnown RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 AGO1Q9UL18 857 aaKnown RBP12.98□□□□□ -0.33
KARS-204ENST00000564578 WNT6Q9Y6F9 365 aa12.98□□□□□ -0.33
KARS-204ENST00000564578 F5P12259 2224 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 A0A0U1RQJ8 604 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 KCNU1A8MYU2 1149 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 ARHGAP6O43182 974 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 CORO1AP31146 461 aaKnown RBP12.97□□□□□ -0.33
KARS-204ENST00000564578 CXCR3P49682 368 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 KPNA1P52294 538 aaPredicted RBP12.97□□□□□ -0.33
KARS-204ENST00000564578 TNK2Q07912 1038 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 CDO1Q16878 200 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 DENND1CQ8IV53 801 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 SLC35G2Q8TBE7 412 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 OSCP1Q8WVF1 389 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 ATRIPQ8WXE1 791 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 PLD4Q96BZ4 506 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 P2RY11Q96G91 374 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 BTBD6Q96KE9 485 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 UHRF1Q96T88 793 aaPredicted RBP12.97□□□□□ -0.33
KARS-204ENST00000564578 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 KCNF1Q9H3M0 494 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 FAM204AQ9H8W3 233 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 SALL4Q9UJQ4 1053 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 DUSP10Q9Y6W6 482 aa12.97□□□□□ -0.33
KARS-204ENST00000564578 CHADO15335 359 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 CCP110O43303 1012 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 F9P00740 461 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 GDI1P31150 447 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 DEUP1Q05D60 604 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 TCEAL1Q15170 157 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 IER5LQ5T953 404 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 STRADAQ7RTN6 431 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 FAM172AQ8WUF8 416 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 ZNF830Q96NB3 372 aaPredicted RBP12.96□□□□□ -0.33
KARS-204ENST00000564578 HPS4Q9NQG7 708 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.96□□□□□ -0.33
KARS-204ENST00000564578 UVRAGQ9P2Y5 699 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 STOML2Q9UJZ1 356 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 SH3BP1Q9Y3L3 701 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 ADGRG1Q9Y653 693 aa12.96□□□□□ -0.33
KARS-204ENST00000564578 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.34
KARS-204ENST00000564578 CCR1P32246 355 aa12.96□□□□□ -0.34
KARS-204ENST00000564578 GBP1P32455 592 aa12.96□□□□□ -0.34
KARS-204ENST00000564578 RDXP35241 583 aaKnown RBP12.96□□□□□ -0.34
KARS-204ENST00000564578 HARS2P49590 506 aaKnown RBP12.96□□□□□ -0.34
KARS-204ENST00000564578 PPP2R5DQ14738 602 aa12.96□□□□□ -0.34
KARS-204ENST00000564578 EML3Q32P44 896 aa12.96□□□□□ -0.34
KARS-204ENST00000564578 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms