RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ADGRA2Q96PE1 1338 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 SEPT4O43236 478 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 PMPCBO75439 489 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 NCR1O76036 304 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 CDKL5O76039 1030 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ITGB3P05106 788 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 CHN1P15882 459 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 NR4A1P22736 598 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ABCD3P28288 659 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 MTHFSP49914 203 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 RCAN1P53805 252 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 ITIH3Q06033 890 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 KRT32Q14532 448 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 PKN1Q16512 942 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 UBXN11Q5T124 520 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 GLB1LQ6UWU2 654 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 TMTC3Q6ZXV5 915 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 PDILTQ8N807 584 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 LSM14AQ8ND56 463 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 CPEB3Q8NE35 698 aaKnown RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 UCMAQ8WVF2 138 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 LPIN2Q92539 896 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 FAR2Q96K12 515 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 TOX2Q96NM4 488 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 KRTAP4-5Q9BYR2 181 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 GLOD4Q9HC38 313 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 AURKAIP1Q9NWT8 199 aaPredicted RBP2.88□□□□□ -1.95
CHD9-209ENST00000564255 TBC1D14Q9P2M4 693 aa2.88□□□□□ -1.95
CHD9-209ENST00000564255 CYP3A7-CYP3A51PA0A087WV96 503 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 GOLGA6L10A0A0M3HER8 536 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PI4KAP2A4QPH2 592 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 SPTLC2O15270 562 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ONECUT2O95948 504 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ACP5P13686 325 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 TNNT1P13805 278 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 DRD1P21728 446 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 CYP3A7P24462 503 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ITPKBP27987 946 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 FOXL2P58012 376 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 GALNT2Q10471 571 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PDCLQ13371 301 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ERV3-1Q14264 604 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 GPR149Q86SP6 731 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 CREB3L4Q8TEY5 395 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 GLMPQ8WWB7 406 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 TRMT61AQ96FX7 289 aaKnown RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 APOPT1Q96IL0 206 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PGBD1Q96JS3 809 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 SYNPO2LQ9H987 977 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 RMI1Q9H9A7 625 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 SAP30LQ9HAJ7 183 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 IL21RQ9HBE5 538 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 SLC22A11Q9NSA0 550 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 NSMCE4AQ9NXX6 385 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 CD207Q9UJ71 328 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 TTLL3Q9Y4R7 772 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 FIBPO43427 364 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ZNF500O60304 480 aaPredicted RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 ZBED4O75132 1171 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 TULP3O75386 442 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PDHA1P08559 390 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 CHMP24386 653 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 LIPAP38571 399 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 DEUP1Q05D60 604 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PTP4A2Q12974 167 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 THOC5Q13769 683 aaKnown RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 PTPRRQ15256 657 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 TOMM20Q15388 145 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 SF3B3Q15393 1217 aaKnown RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 ZNF124Q15973 351 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 MEA1Q16626 185 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 P3H1Q32P28 736 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 HS1BP3Q53T59 392 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ZNF618Q5T7W0 954 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 FAM205BPQ63HN1 556 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 INO80CQ6PI98 192 aaPredicted RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 KRT27Q7Z3Y8 459 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ARMC8Q8IUR7 673 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 LRRC56Q8IYG6 542 aaPredicted RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 B3GALNT2Q8NCR0 500 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 NGDNQ8NEJ9 315 aaKnown RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 OR52L2PQ8NGH6 319 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ARRDC3Q96B67 414 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 MYEOVQ96EZ4 313 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 MASTLQ96GX5 879 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 KLC2Q9H0B6 622 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 GHITMQ9H3K2 345 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 ZNF703Q9H7S9 590 aaPredicted RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 SMYD2Q9NRG4 433 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PPP1R14DQ9NXH3 145 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 SLC12A4Q9UP95 1085 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 PCDHA10Q9Y5I2 948 aa2.87□□□□□ -1.95
CHD9-209ENST00000564255 TTBK1Q5TCY1 1321 aaPredicted RBP2.87□□□□□ -1.95
CHD9-209ENST00000564255 CCDC187A0A096LP49 1063 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 OTOL1A6NHN0 477 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 AGAP5A6NIR3 686 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 SCGB1D1O95968 90 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 MBPP02686 304 aaPredicted RBP2.86□□□□□ -1.95
CHD9-209ENST00000564255 ALADP13716 330 aa2.86□□□□□ -1.95
CHD9-209ENST00000564255 CPA1P15085 419 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms