RNA–Protein interactions for RNA: ENST00000564239.1

BBS4-207, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-207ENST00000564239 ITGA5P08648 1049 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 DUSP1P28562 367 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 EPHB2P29323 1055 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 GALNT1Q10472 559 aaPredicted RBP5.33□□□□□ -1.56
BBS4-207ENST00000564239 CSHL1Q14406 222 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 PUM3Q15397 648 aaKnown RBP5.33□□□□□ -1.56
BBS4-207ENST00000564239 SEC23BQ15437 767 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 PFKFB4Q16877 469 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 ACSM6Q6P461 480 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 GALNT16Q8N428 558 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 FAM71BQ8TC56 605 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 STYXQ8WUJ0 223 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 PAAF1Q9BRP4 392 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 QTRT1Q9BXR0 403 aaKnown RBP5.33□□□□□ -1.56
BBS4-207ENST00000564239 PDGFCQ9NRA1 345 aa5.33□□□□□ -1.56
BBS4-207ENST00000564239 LGALS16A8MUM7 142 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 F5H423 210 aaPredicted RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 CER1O95813 267 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 MATN1P21941 496 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 KLRK1P26718 216 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 PDIA3P30101 505 aaKnown RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 ALDH18A1P54886 795 aaKnown RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 PTK2BQ14289 1009 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 ELF2Q15723 593 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 CC2D1BQ5T0F9 858 aaKnown RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 YTHDF3Q7Z739 585 aaKnown RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 NEK8Q86SG6 692 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 GATAD2AQ86YP4 633 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 VPS37AQ8NEZ2 397 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 OR52L2PQ8NGH6 319 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 POF1BQ8WVV4 589 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 VOPP1Q96AW1 172 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 RPS6KC1Q96S38 1066 aa5.32□□□□□ -1.56
BBS4-207ENST00000564239 TP63Q9H3D4 680 aaPredicted RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 SCAF8Q9UPN6 1271 aaKnown RBP5.32□□□□□ -1.56
BBS4-207ENST00000564239 C16orf96A6NNT2 1141 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 DNPH1O43598 174 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 SKAP2O75563 359 aaPredicted RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 PRR35P0CG20 571 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 ABCG1P45844 678 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 ICA1Q05084 483 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 GAB1Q13480 694 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 BIRC2Q13490 618 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 KPNB1Q14974 876 aaKnown RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 SUPT20HL1Q3ZLR7 823 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 ZACNQ401N2 412 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 MEX3CQ5U5Q3 659 aaKnown RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 SLC18B1Q6NT16 456 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 MIS18BP1Q6P0N0 1132 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 C16orf89Q6UX73 402 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 KYAT3Q6YP21 454 aaKnown RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 KRT27Q7Z3Y8 459 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 MYLK4Q86YV6 388 aaPredicted RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 NRSN1Q8IZ57 195 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 OSR1Q8TAX0 266 aaPredicted RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 SLC22A17Q8WUG5 538 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 GLMPQ8WWB7 406 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 NPIPB3Q92617 1050 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 AKAP1Q92667 903 aaKnown RBP eCLIP5.31□□□□□ -1.56
BBS4-207ENST00000564239 MCRS1Q96EZ8 462 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 RNF26Q9BY78 433 aaPredicted RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 CDCP1Q9H5V8 836 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 KCNK9Q9NPC2 374 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 FBXO28Q9NVF7 368 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 KLHL13Q9P2N7 655 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 MAFFQ9ULX9 164 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 UBE2J1Q9Y385 318 aaPredicted RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 PCDHB7Q9Y5E2 793 aa5.31□□□□□ -1.56
BBS4-207ENST00000564239 SETD1BQ9UPS6 1966 aaKnown RBP5.31□□□□□ -1.56
BBS4-207ENST00000564239 SMIM35A0A1B0GVV1 85 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 PRYO14603 147 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 RNF8O76064 485 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 KELP23276 732 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 SSBP2P81877 361 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 CHAF1AQ13111 956 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 ZNF268Q14587 947 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 DAZAP2Q15038 168 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 CNGA3Q16281 694 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 SRSF7Q16629 238 aaKnown RBP eCLIP5.3□□□□□ -1.56
BBS4-207ENST00000564239 PFKFB3Q16875 520 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 RINT1Q6NUQ1 792 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 C16orf71Q8IYS4 520 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 OR1N1Q8NGS0 311 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 WDR60Q8WVS4 1066 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 MAP4K1Q92918 833 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 NUAK2Q9H093 628 aa5.3□□□□□ -1.56
BBS4-207ENST00000564239 HEMK1Q9Y5R4 338 aaPredicted RBP5.3□□□□□ -1.56
BBS4-207ENST00000564239 CYP2D7A0A087X1C5 515 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 LOC105369274A0A096LPK9 316 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.29□□□□□ -1.56
BBS4-207ENST00000564239 LOC102723532A0A0G2JNH3 316 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 TTC34A8MYJ7 566 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 SYT5O00445 386 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 FCHO1O14526 889 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 RPP40O75818 363 aaKnown RBP5.29□□□□□ -1.56
BBS4-207ENST00000564239 SFPQP23246 707 aaKnown RBP eCLIP5.29□□□□□ -1.56
BBS4-207ENST00000564239 NDUFS1P28331 727 aa5.29□□□□□ -1.56
BBS4-207ENST00000564239 HOXD12P35452 270 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms