RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CEACAM1P13688 526 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 WASP42768 502 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 FMO5P49326 533 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 ZNF445P59923 1031 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 RPL6Q02878 288 aaKnown RBP17.51■□□□□ 0.39
CCNF-203ENST00000564236 BECN1Q14457 450 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 PSAPL1Q6NUJ1 521 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 LCLAT1Q6UWP7 414 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 RSRC2Q7L4I2 434 aaKnown RBP17.51■□□□□ 0.39
CCNF-203ENST00000564236 LMO3Q8TAP4 145 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 NUP205Q92621 2012 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 ZNF419Q96HQ0 510 aaPredicted RBP17.51■□□□□ 0.39
CCNF-203ENST00000564236 IRX2Q9BZI1 471 aaPredicted RBP17.51■□□□□ 0.39
CCNF-203ENST00000564236 CAPN10Q9HC96 672 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 CNGB3Q9NQW8 809 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 CACNA2D2Q9NY47 1150 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 PLK2Q9NYY3 685 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 HESX1Q9UBX0 185 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 WASF3Q9UPY6 502 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 STON1Q9Y6Q2 735 aa17.51■□□□□ 0.39
CCNF-203ENST00000564236 SERPINF2P08697 491 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 CD44P16070 742 aaKnown RBP17.5■□□□□ 0.39
CCNF-203ENST00000564236 ITPKAP23677 461 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 NOVA1P51513 510 aaKnown RBP17.5■□□□□ 0.39
CCNF-203ENST00000564236 ZNF33AQ06730 810 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 STIM1Q13586 685 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 GEN1Q17RS7 908 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 DUOXA1Q1HG43 343 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 TTI2Q6NXR4 508 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 ANKS1BQ7Z6G8 1248 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 DENND1CQ8IV53 801 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 SLC35F5Q8WV83 523 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 ERCC4Q92889 916 aaPredicted RBP17.5■□□□□ 0.39
CCNF-203ENST00000564236 LRRC4Q9HBW1 653 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 ABCC13Q9NSE7 274 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 USP36Q9P275 1121 aaKnown RBP17.5■□□□□ 0.39
CCNF-203ENST00000564236 NFE2L3Q9Y4A8 694 aa17.5■□□□□ 0.39
CCNF-203ENST00000564236 THADAQ6YHU6 1953 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 CHD8Q9HCK8 2581 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 SLC12A8A0AV02 714 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 YJEFN3A6XGL0 299 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 E7ENQ6 273 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 TIMM44O43615 452 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 IGLV3-19P01714 112 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 CYBBP04839 570 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 ENGP17813 658 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 BMP6P22004 513 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 MARSP56192 900 aaKnown RBP17.49■□□□□ 0.39
CCNF-203ENST00000564236 DAOAP59103 153 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 ADIGQ0VDE8 80 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 STILQ15468 1287 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 CNGA2Q16280 664 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 SH3PXD2AQ5TCZ1 1133 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 BSPRYQ5W0U4 402 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 ARMCX6Q7L4S7 300 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 FMNL3Q8IVF7 1028 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 SLC41A1Q8IVJ1 513 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 IRGQQ8WZA9 623 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 BHMTQ93088 406 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 ELOVL2Q9NXB9 296 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 MAN1B1Q9UKM7 699 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 CIZ1Q9ULV3 898 aaPredicted RBP17.49■□□□□ 0.39
CCNF-203ENST00000564236 SLC6A14Q9UN76 642 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 RAD54BQ9Y620 910 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 MYH10P35580 1976 aa17.49■□□□□ 0.39
CCNF-203ENST00000564236 WASH3PC4AMC7 463 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 GABBR2O75899 941 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 IGLV3-27P01718 113 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 HMBSP08397 361 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 HOXD9P28356 352 aaPredicted RBP17.48■□□□□ 0.39
CCNF-203ENST00000564236 IL12RB1P42701 662 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 HARS2P49590 506 aaKnown RBP17.48■□□□□ 0.39
CCNF-203ENST00000564236 GCNT1Q02742 428 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 STARD3Q14849 445 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 FUT11Q495W5 492 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 MPPE1Q53F39 396 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 KIAA0907Q7Z7F0 614 aaPredicted RBP17.48■□□□□ 0.39
CCNF-203ENST00000564236 PIP4P1Q86T03 277 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCNF-203ENST00000564236 UCMAQ8WVF2 138 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 TFAP2BQ92481 460 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 NT5C1BQ96P26 610 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
CCNF-203ENST00000564236 ZSWIM1Q9BR11 485 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 CLEC4EQ9ULY5 219 aa17.48■□□□□ 0.39
CCNF-203ENST00000564236 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.48■□□□□ 0.39
CCNF-203ENST00000564236 PPP1R3GB7ZBB8 358 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 GIPC1O14908 333 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 CD19P15391 556 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 RPL34P49207 117 aaKnown RBP17.47■□□□□ 0.39
CCNF-203ENST00000564236 SEMA3BQ13214 749 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 MORC3Q14149 939 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 MPP7Q5T2T1 576 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 ADGRF1Q5T601 910 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 TMEM215Q68D42 235 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 SIX6OS1Q8N1H7 587 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 UBA3Q8TBC4 463 aa17.47■□□□□ 0.39
CCNF-203ENST00000564236 RNF139Q8WU17 664 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms