RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 PHF2O75151 1096 aa12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 SELPP16109 830 aa12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 DHPSP49366 369 aaPredicted RBP12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 SERPINB9P50453 376 aa12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 DDR2Q16832 855 aa12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 SHROOM1Q2M3G4 852 aaPredicted RBP12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 USP39Q53GS9 565 aaKnown RBP12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 ZNF655Q8N720 491 aaPredicted RBP12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 FERD3LQ96RJ6 166 aa12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 GAKO14976 1311 aa12.4□□□□□ -0.43
TUBGCP4-208ENST00000564079 BMP10O95393 424 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 KCNJ1P48048 391 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SKP1P63208 163 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 TMC2Q8TDI7 906 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 LRRC4BQ9NT99 713 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 AIM2O14862 343 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 RARGP13631 454 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 MRPS15P82914 257 aaKnown RBP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SRSF11Q05519 484 aaKnown RBP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 FPGSQ05932 587 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 CCDC142Q17RM4 750 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 PLA2G4EQ3MJ16 856 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 BRSK2Q8IWQ3 736 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 CEP70Q8NHQ1 597 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 TKTL2Q9H0I9 626 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 ZNF536O15090 1300 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 CDC42BPAQ5VT25 1732 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 GMFGO60234 142 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 LUC7L3O95232 432 aaKnown RBP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 PSMD8P48556 350 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SAMD3Q8N6K7 520 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 KRT84Q9NSB2 600 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 COL5A2P05997 1499 aaPredicted RBP12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SCAMP1O15126 338 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 ANXA5P08758 320 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 LAG3P18627 525 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 APLP1P51693 650 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 TAF13Q15543 124 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 USP49Q70CQ1 688 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SEPT4O43236 478 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 HOXC6P09630 235 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 SLC8A1P32418 973 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 GATAD2AQ86YP4 633 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 UROC1Q96N76 676 aa12.39□□□□□ -0.43
TUBGCP4-208ENST00000564079 ASGR1P07306 291 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 Q4G0T1 1027 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 SUGP1Q8IWZ8 645 aaKnown RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GTF3C4Q9UKN8 822 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GRID2IPA4D2P6 1211 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CHUKO15111 745 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CYP2F1P24903 491 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 SNRPD1P62314 119 aaKnown RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CASP8Q14790 479 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 ADSSL1Q8N142 457 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 IPCEF1Q8WWN9 437 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 RERGQ96A58 199 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 REXO5Q96IC2 774 aaKnown RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 ISM1B1AKI9 464 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 PLEKP08567 350 aaPredicted RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CSH1P0DML2 217 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CSH2P0DML3 217 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 HNF4AP41235 474 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 TEAD4Q15561 434 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 EDRF1Q3B7T1 1238 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 DENND1BQ6P3S1 775 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 IYDQ6PHW0 289 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 SCAIQ8N9R8 606 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CTNNAL1Q9UBT7 734 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GRK2P25098 689 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GRB10Q13322 594 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 FAM46CQ5VWP2 391 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 TRIM69Q86WT6 500 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 DDX42Q86XP3 938 aaKnown RBP eCLIP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 TAS1R2Q8TE23 839 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CNPPD1Q9BV87 410 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GID8Q9NWU2 228 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 DDX20Q9UHI6 824 aaKnown RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 INPP4BO15327 924 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 RNASEH2AO75792 299 aaKnown RBP12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 OR6A2O95222 327 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 PEX19P40855 299 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 GLUD2P49448 558 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CSHL1Q14406 222 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 RNF44Q7L0R7 432 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 LRRC8DQ7L1W4 858 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 SPATA20Q8TB22 786 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 CYGBQ8WWM9 190 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 ZNF333Q96JL9 665 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 PLK2Q9NYY3 685 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 SMIM22K7EJ46 135 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 OR10H2O60403 315 aa12.38□□□□□ -0.43
TUBGCP4-208ENST00000564079 FSBPO95073 299 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms