RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 BFSP2Q13515 415 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAXCQ5TGI0 409 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 RBM44Q6ZP01 1051 aaKnown RBP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 C9orf47Q6ZRZ4 202 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM57BQ71RH2 274 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 MMP21Q8N119 569 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 MPLKIPQ8TAP9 179 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 ABHD5Q8WTS1 349 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 WASF1Q92558 559 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 AKAP1Q92667 903 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 GATA5Q9BWX5 397 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM234AQ9H0X4 552 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZBTB26Q9HCK0 441 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 SEMA4BQ9NPR2 832 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 DDX21Q9NR30 783 aaKnown RBP eCLIP3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 GJB4Q9NTQ9 266 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 ASNSD1Q9NWL6 643 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 SHROOM4Q9ULL8 1493 aa3.89□□□□□ -1.79
HMGB1P33-201ENST00000563485 IGKV2D-30A0A075B6S6 120 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCDC187A0A096LP49 1063 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CLCA1A8K7I4 914 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 AREL1O15033 823 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCNT2O60583 730 aaKnown RBP3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 COQ9O75208 318 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 FGF2P09038 288 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 TSHRP16473 764 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 FGFR2P21802 821 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 MST1P26927 711 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 DUSP1P28562 367 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCKARP32238 428 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 HTR6P50406 440 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 NANOS2P60321 138 aaKnown RBP3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 B4GALNT1Q00973 533 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 KLHL22Q53GT1 634 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 TMEM196Q5HYL7 178 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 DGKHQ86XP1 1220 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 ANKRD13AQ8IZ07 590 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCDC33Q8N5R6 958 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 RNF152Q8N8N0 203 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 ADAMTS15Q8TE58 950 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CELF1Q92879 486 aaKnown RBP3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 TTC17Q96AE7 1141 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 P2RY11Q96G91 374 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 CAMK1GQ96NX5 476 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 RNF26Q9BY78 433 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 MOV10Q9HCE1 1003 aaKnown RBP3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 TMOD4Q9NZQ9 345 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 KLHL42Q9P2K6 505 aa3.88□□□□□ -1.79
HMGB1P33-201ENST00000563485 A0A1W2PPC1 479 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 KCNQ3O43525 872 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 NDUFS1P28331 727 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 HOXD12P35452 270 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 IGHMBP2P38935 993 aaKnown RBP3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 THBS3P49746 956 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC12A2P55011 1212 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 RAP1GAP2Q684P5 730 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 MRNIPQ6NTE8 343 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 KYAT3Q6YP21 454 aaKnown RBP3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 KIAA0408Q6ZU52 694 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 RFX6Q8HWS3 928 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 CCDC28AQ8IWP9 274 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 PELI3Q8N2H9 469 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 MARK4Q96L34 752 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 SENP7Q9BQF6 1050 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 MAGEB5Q9BZ81 275 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 TMEM8AQ9HCN3 771 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 COG5Q9UP83 839 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 FAM50BQ9Y247 325 aa3.87□□□□□ -1.79
HMGB1P33-201ENST00000563485 IGLV5-39A0A0G2JS06 123 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 A0A1W2PPC4 97 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 TTC34A8MYJ7 566 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZNF814B7Z6K7 855 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 F8W810 466 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZSCAN9O15535 394 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 TLX3O43711 291 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 UGDHO60701 494 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 USP12O75317 370 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC3A2P08195 630 aaKnown RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 MYL4P12829 197 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ALADP13716 330 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 MATN1P21941 496 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC5A2P31639 672 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 SOX2P48431 317 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 PRIM2P49643 509 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 CASP5P51878 434 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ELF2Q15723 593 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 MIDNQ504T8 468 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ARHGAP15Q53QZ3 475 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 ZNF549Q6P9A3 640 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 USP17L6PQ6QN14 398 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 MEPCEQ7L2J0 689 aaKnown RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 FMNL3Q8IVF7 1028 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 UEVLDQ8IX04 471 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 CLASRPQ8N2M8 674 aaKnown RBP3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 BCAS4Q8TDM0 211 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 SLC25A28Q96A46 364 aa3.86□□□□□ -1.79
HMGB1P33-201ENST00000563485 NLRP4Q96MN2 994 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms