RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 MYRIPQ8NFW9 859 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 RPGRIP1Q96KN7 1286 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 SERPINB11Q96P15 392 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 TKTL2Q9H0I9 626 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 PLEKHA4Q9H4M7 779 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 WDCPQ9H6R7 721 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 RBM12Q9NTZ6 932 aaKnown RBP10.56□□□□□ -0.72
SMG1-208ENST00000563448 ARHGEF38Q9NXL2 777 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 RASAL2Q9UJF2 1139 aa10.56□□□□□ -0.72
SMG1-208ENST00000563448 KRIT1O00522 736 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 RFPL2O75678 378 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 CETN2P41208 172 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 PPP3CCP48454 512 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 AIF1P55008 147 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 SCAPQ12770 1279 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 KRT81Q14533 505 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 CLUL1Q15846 466 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 DUSP6Q16828 381 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 KAZNQ674X7 775 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 RTL10Q7L3V2 364 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 PSTKQ8IV42 348 aaKnown RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 HDAC7Q8WUI4 952 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 TSC1Q92574 1164 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 SLC39A13Q96H72 371 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 FCRL2Q96LA5 508 aaPredicted RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 NAP1L3Q99457 506 aaPredicted RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 TLR6Q9Y2C9 796 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 C2orf78A6NCI8 922 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 KCNU1A8MYU2 1149 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 OAS1P00973 400 aaKnown RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 ATP5C1P36542 298 aaKnown RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 NRIP1P48552 1158 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 TBX4P57082 545 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 RBM10P98175 930 aaKnown RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 PPP2R5DQ14738 602 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 TRIP4Q15650 581 aaPredicted RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 ARL13BQ3SXY8 428 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 ANKRD20A8PQ5CZ79 823 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 PPP6R3Q5H9R7 873 aaPredicted RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 BRMS1LQ5PSV4 323 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 HECTD3Q5T447 861 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 GAREM2Q75VX8 874 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 MIB1Q86YT6 1006 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 MAP7D3Q8IWC1 876 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 ELMOD1Q8N336 334 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 RNF34Q969K3 372 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 FAF2Q96CS3 445 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 CDK5RAP1Q96SZ6 601 aaKnown RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 CALN1Q9BXU9 219 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 TLE6Q9H808 572 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 HCFC1R1Q9NWW0 138 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 MARCH2Q9P0N8 246 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMG1-208ENST00000563448 EFR3BQ9Y2G0 817 aa10.55□□□□□ -0.72
SMG1-208ENST00000563448 V9GYY5 206 aaPredicted RBP10.55□□□□□ -0.72
SMG1-208ENST00000563448 NYNRINQ9P2P1 1898 aaKnown RBP10.54□□□□□ -0.72
SMG1-208ENST00000563448 SLC12A8A0AV02 714 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 EFCAB8A8MWE9 144 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 CCDC188H7C350 402 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 COCHO43405 550 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 IGLV3-27P01718 113 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 GABRR2P28476 465 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 HOXA9P31269 272 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 CCR1P32246 355 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 GTF2F1P35269 517 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMG1-208ENST00000563448 TUBP50607 506 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 NNTQ13423 1086 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 KCNC3Q14003 757 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 NAA30Q147X3 362 aaPredicted RBP10.54□□□□□ -0.72
SMG1-208ENST00000563448 PABPC1LQ4VXU2 614 aaKnown RBP10.54□□□□□ -0.72
SMG1-208ENST00000563448 EFHC2Q5JST6 749 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 KLHDC10Q6PID8 442 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 TADA2BQ86TJ2 420 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 RFX6Q8HWS3 928 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 MMGT1Q8N4V1 131 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 PRELID2Q8N945 189 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 RNF157Q96PX1 679 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 CORO1BQ9BR76 489 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 ZNF670Q9BS34 389 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 RNF38Q9H0F5 515 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMG1-208ENST00000563448 CWC15Q9P013 229 aaKnown RBP10.54□□□□□ -0.72
SMG1-208ENST00000563448 DNMT3BQ9UBC3 853 aaKnown RBP10.54□□□□□ -0.72
SMG1-208ENST00000563448 DNMT3LQ9UJW3 386 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 CHD5Q8TDI0 1954 aa10.54□□□□□ -0.72
SMG1-208ENST00000563448 ZNF487B1APH4 448 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 FAM72CH0Y354 149 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CTIFO43310 598 aaKnown RBP10.53□□□□□ -0.72
SMG1-208ENST00000563448 PAGE1O75459 146 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 TJP3O95049 919 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 HMBSP08397 361 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 HNRNPA1P09651 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMG1-208ENST00000563448 MYL4P12829 197 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 GOT1P17174 413 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 PTPN2P17706 415 aa10.53□□□□□ -0.72
SMG1-208ENST00000563448 CYP4F8P98187 520 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms