RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 ZNF197O14709 1029 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 IRAK2O43187 625 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 PSTPIP1O43586 416 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 TLR5O60602 858 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 OAS1P00973 400 aaKnown RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 RHOP08100 348 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 PRLRP16471 622 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 HOXB8P17481 243 aaPredicted RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 MIPP30301 263 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CASQ1P31415 396 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CTNNA1P35221 906 aaKnown RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 AIF1P55008 147 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 PITX1P78337 314 aaPredicted RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 SLC25A11Q02978 314 aaKnown RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 CBX2Q14781 532 aaPredicted RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 PDZD4Q76G19 769 aaPredicted RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 SND1Q7KZF4 910 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDH11-207ENST00000563255 POLNQ7Z5Q5 900 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 BMP8AQ7Z5Y6 402 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 TAC4Q86UU9 113 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CPNE8Q86YQ8 564 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 RHOT1Q8IXI2 618 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 SMG7Q92540 1137 aaKnown RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 MRPS31Q92665 395 aaKnown RBP15.35■□□□□ 0.05
CDH11-207ENST00000563255 SERPINB11Q96P15 392 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 APOL5Q9BWW9 433 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 TLR10Q9BXR5 811 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CCSER2Q9H7U1 834 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 PIDD1Q9HB75 910 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 HCFC1R1Q9NWW0 138 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CALCOCO1Q9P1Z2 691 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 ZMYM5Q9UJ78 669 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 USP18Q9UMW8 372 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDH11-207ENST00000563255 PCDHA3Q9Y5H8 950 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CLUHO75153 1309 aa15.35■□□□□ 0.05
CDH11-207ENST00000563255 CTAGE9A4FU28 777 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 FANCGO15287 622 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 DDX3YO15523 660 aaKnown RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 OLFM2O95897 454 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 KRT7P08729 469 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 MYL4P12829 197 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 DDX6P26196 483 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDH11-207ENST00000563255 CXCR3P49682 368 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 PEX5P50542 639 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 KPNA1P52294 538 aaPredicted RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 TAS2R40P59535 323 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 BOLA3Q53S33 107 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 PRSS36Q5K4E3 855 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 C10orf120Q5SQS8 335 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 IER5LQ5T953 404 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 DAB2IPQ5VWQ8 1189 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 PAPD7Q5XG87 772 aaKnown RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 GRASPQ7Z6J2 395 aaPredicted RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 GPR149Q86SP6 731 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 SUGP1Q8IWZ8 645 aaKnown RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 UBL4BQ8N7F7 174 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 C12orf76Q8N812 135 aaPredicted RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 PRSS33Q8NF86 280 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 ATXN3LQ9H3M9 355 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 FAM204AQ9H8W3 233 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 WDR6Q9NNW5 1121 aaKnown RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 PIGVQ9NUD9 493 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 FAM86C1Q9NVL1 165 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 DDIT4Q9NX09 232 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.34■□□□□ 0.05
CDH11-207ENST00000563255 SFMBT1Q9UHJ3 866 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 DNMT3LQ9UJW3 386 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 NUDT5Q9UKK9 219 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 PACSIN2Q9UNF0 486 aaPredicted RBP15.34■□□□□ 0.05
CDH11-207ENST00000563255 TLR6Q9Y2C9 796 aa15.34■□□□□ 0.05
CDH11-207ENST00000563255 A0A1W2PRU2 124 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 ENC1O14682 589 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 COCHO43405 550 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 PRPSAP2O60256 369 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 MOSPD3O75425 235 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 ATP1A1P05023 1023 aaKnown RBP15.33■□□□□ 0.04
CDH11-207ENST00000563255 TCF4P15884 667 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 CCR2P41597 374 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 SSR1P43307 286 aaKnown RBP15.33■□□□□ 0.04
CDH11-207ENST00000563255 EFEMP1Q12805 493 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 NME3Q13232 169 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 PPP2R5DQ14738 602 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 TRIP4Q15650 581 aaPredicted RBP15.33■□□□□ 0.04
CDH11-207ENST00000563255 RAB6CQ53S08 254 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 BRMS1LQ5PSV4 323 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 ERMARDQ5T6L9 678 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 SCYL2Q6P3W7 929 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 SYCE2Q6PIF2 218 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 TMC5Q6UXY8 1006 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 PSTKQ8IV42 348 aaKnown RBP15.33■□□□□ 0.04
CDH11-207ENST00000563255 KIF18AQ8NI77 898 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 SHKBP1Q8TBC3 707 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 ADAM32Q8TC27 787 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 TEKT4Q8WW24 435 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 SUSD6Q92537 303 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 NTAN1Q96AB6 310 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 SLC39A13Q96H72 371 aa15.33■□□□□ 0.04
CDH11-207ENST00000563255 RNF38Q9H0F5 515 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms