RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 VPS52Q8N1B4 723 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 RNF169Q8NCN4 708 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 TGS1Q96RS0 853 aaKnown RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 SSU72Q9NP77 194 aaKnown RBP10.16□□□□□ -0.78
SMG1-205ENST00000561947 PNPLA8Q9NP80 782 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 CNGB3Q9NQW8 809 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 ARHGEF4Q9NR80 690 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 FGFR1OP2Q9NVK5 253 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 COX16Q9P0S2 106 aa10.16□□□□□ -0.78
SMG1-205ENST00000561947 TCRBV9S1A1TA0A576 114 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 C9IYK1 514 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 MFSD11O43934 449 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 SNX3O60493 162 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 FSBPO95073 299 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 METTL18O95568 372 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 ASMTLO95671 621 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 ALDH1A1P00352 501 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 FYNP06241 537 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 APRTP07741 180 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 ODC1P11926 461 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 TPSB2P20231 275 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 CACNA2D1P54289 1103 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 NME3Q13232 169 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 TPSAB1Q15661 275 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 GPRIN1Q7Z2K8 1008 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 CAND1Q86VP6 1230 aaKnown RBP10.15□□□□□ -0.78
SMG1-205ENST00000561947 CCDC33Q8N5R6 958 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 MZB1Q8WU39 189 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 TFB1MQ8WVM0 346 aaKnown RBP10.15□□□□□ -0.78
SMG1-205ENST00000561947 SMARCD1Q96GM5 515 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 KCNK16Q96T55 309 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 RTP3Q9BQQ7 232 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 TMPRSS4Q9NRS4 437 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 PIGVQ9NUD9 493 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 TMEM30AQ9NV96 361 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 SF3B1O75533 1304 aaKnown RBP eCLIP10.15□□□□□ -0.788e-6■■■■■ 107
SMG1-205ENST00000561947 A0A0U1RQF3 1178 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 YJEFN3A6XGL0 299 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 HHLA1C9JL84 531 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 E7ENQ6 273 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 CAPN9O14815 690 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 TYROBPO43914 113 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 CPP00450 1065 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 POMCP01189 267 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 PRKAR2AP13861 404 aaKnown RBP10.15□□□□□ -0.78
SMG1-205ENST00000561947 VAV1P15498 845 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 AIF1P55008 147 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 GRIK3Q13003 919 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 SPARCL1Q14515 664 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 MICALL1Q8N3F8 863 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 SLC7A14Q8TBB6 771 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 HTR3CQ8WXA8 447 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 CCT6BQ92526 530 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 MYLPFQ96A32 169 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 CFAP36Q96G28 342 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 SLC9A7Q96T83 725 aa10.15□□□□□ -0.78
SMG1-205ENST00000561947 PTPRDP23468 1912 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PATJQ8NI35 1801 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CCT8L1PA6NM43 557 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 I3L4J1 428 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PIAS1O75925 651 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 TAC1P20366 129 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CA4P22748 312 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 FOXN2P32314 431 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 RPA3P35244 121 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 MAGEA3P43357 314 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CAP1Q01518 475 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PTK7Q13308 1070 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 SEMA5AQ13591 1074 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 DPYSQ14117 519 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 TRIM71Q2Q1W2 868 aaKnown RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 FAM26DQ5JW98 314 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PCSK9Q8NBP7 692 aaKnown RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 NTAN1Q96AB6 310 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 LRRC39Q96DD0 335 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PGBD4Q96DM1 585 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 ADAM2Q99965 735 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 PAIP2Q9BPZ3 127 aaKnown RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 KDM4CQ9H3R0 1056 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 ACTR5Q9H9F9 607 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 USP15Q9Y4E8 981 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 TTLL3Q9Y4R7 772 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 COL4A4P53420 1690 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 FRMPD3Q5JV73 1810 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 A0A0A0MRY4 1105 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 TMEM88BA6NKF7 163 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CREB3O43889 395 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 B3GAT3O94766 335 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 LTFP02788 710 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 CYP11A1P05108 521 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 USP17L7P0C7H9 530 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 ELNP15502 786 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 KRT4P19013 534 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 IBSPP21815 317 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 GBP2P32456 591 aaPredicted RBP10.14□□□□□ -0.79
SMG1-205ENST00000561947 BRCC3P46736 316 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 SCAPQ12770 1279 aa10.14□□□□□ -0.79
SMG1-205ENST00000561947 SF3A3Q12874 501 aaKnown RBP eCLIP10.14□□□□□ -0.79
SMG1-205ENST00000561947 PAFAH1B3Q15102 231 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms