RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CHPFQ8IZ52 775 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 SCML4Q8N228 414 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 PGBD3Q8N328 593 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 TRIML1Q8N9V2 468 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 RBBP8NLQ8NC74 664 aaPredicted RBP10.76□□□□□ -0.69
CLK3-205ENST00000561673 RNF139Q8WU17 664 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 TCEAL3Q969E4 200 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 PLD4Q96BZ4 506 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 ERLEC1Q96DZ1 483 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 MED15Q96RN5 788 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 INTS2Q9H0H0 1204 aaKnown RBP10.76□□□□□ -0.69
CLK3-205ENST00000561673 CD248Q9HCU0 757 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 CNGB3Q9NQW8 809 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 OLA1Q9NTK5 396 aaKnown RBP10.76□□□□□ -0.69
CLK3-205ENST00000561673 RWDD2AQ9UIY3 292 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 CLEC4EQ9ULY5 219 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 SLC27A6Q9Y2P4 619 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 EML5Q05BV3 1969 aa10.76□□□□□ -0.69
CLK3-205ENST00000561673 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 WASH3PC4AMC7 463 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 MAP3K13O43283 966 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 FGFR1OPO95684 399 aaKnown RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 GABRG2P18507 467 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 HARS2P49590 506 aaKnown RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 LIMK1P53667 647 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 MFAP3P55082 362 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 BYSLQ13895 437 aaKnown RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 STILQ15468 1287 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 GEN1Q17RS7 908 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 STPG1Q5TH74 334 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 SDE2Q6IQ49 451 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 LPCAT2Q7L5N7 544 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 CREBRFQ8IUR6 639 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 FAM217AQ8IXS0 508 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 TMEFF1Q8IYR6 380 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 CPXM2Q8N436 756 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 IPO4Q8TEX9 1081 aaKnown RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 CLEC4CQ8WTT0 213 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 DDI1Q8WTU0 396 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 PIWIL1Q96J94 861 aaKnown RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 SPACA7Q96KW9 195 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 HSFY1Q96LI6 401 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 GABRG3Q99928 467 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 UBE2TQ9NPD8 197 aaPredicted RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 ABCC13Q9NSE7 274 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 CACNA2D2Q9NY47 1150 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 CHMP5Q9NZZ3 219 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 CNTN6Q9UQ52 1028 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 HBS1LQ9Y450 684 aaKnown RBP10.75□□□□□ -0.69
CLK3-205ENST00000561673 RAD54BQ9Y620 910 aa10.75□□□□□ -0.69
CLK3-205ENST00000561673 GFRA2O00451 464 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 TM4SF5O14894 197 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 MSI1O43347 362 aaKnown RBP10.74□□□□□ -0.69
CLK3-205ENST00000561673 CYBBP04839 570 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 KRT5P13647 590 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 NDUFV2P19404 249 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 PTGER3P43115 390 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 GPD2P43304 727 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 DHPSP49366 369 aaPredicted RBP10.74□□□□□ -0.69
CLK3-205ENST00000561673 IL31Q6EBC2 164 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 CYP2U1Q7Z449 544 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 IRF2BP1Q8IU81 584 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 IRGQQ8WZA9 623 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 PIGKQ92643 395 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 CRACR2AQ9BSW2 395 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 CALCOCO1Q9P1Z2 691 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 STOML2Q9UJZ1 356 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 NCOR2Q9Y618 2525 aa10.74□□□□□ -0.69
CLK3-205ENST00000561673 PATE3B3GLJ2 98 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ZBTB24O43167 697 aaPredicted RBP10.73□□□□□ -0.69
CLK3-205ENST00000561673 TSPAN3O60637 253 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 FBXO21O94952 628 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 LTFP02788 710 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 FYNP06241 537 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 SLC9A1P19634 815 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 HOXD9P28356 352 aaPredicted RBP10.73□□□□□ -0.69
CLK3-205ENST00000561673 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
CLK3-205ENST00000561673 APBA1Q02410 837 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 PPM1JQ5JR12 505 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 SPDYCQ5MJ68 293 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ADGRF1Q5T601 910 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 TMEM215Q68D42 235 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 MSANTD2Q6P1R3 559 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 DENND1BQ6P3S1 775 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 GJB7Q6PEY0 223 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ARMCX6Q7L4S7 300 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ANKS1BQ7Z6G8 1248 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 DEFB119Q8N690 84 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 EFCAB3Q8N7B9 438 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 MLKLQ8NB16 471 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 SLC2A11Q9BYW1 496 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 MIS12Q9H081 205 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 SLC6A17Q9H1V8 727 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ACP6Q9NPH0 428 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 TMEM74BQ9NUR3 256 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ELOVL2Q9NXB9 296 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 THAP10Q9P2Z0 257 aaPredicted RBP10.73□□□□□ -0.69
CLK3-205ENST00000561673 STON1Q9Y6Q2 735 aa10.73□□□□□ -0.69
CLK3-205ENST00000561673 ABCA7Q8IZY2 2146 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms