RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 NUDT3O95989 172 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 VIPP01282 170 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 CD19P15391 556 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 PDIA3P30101 505 aaKnown RBP4.3□□□□□ -1.72
HERC1-215ENST00000561436 ADRA1BP35368 520 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 CLK3P49761 638 aaKnown RBP4.3□□□□□ -1.72
HERC1-215ENST00000561436 PGDP52209 483 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 BCAT1P54687 386 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 PTK2BQ14289 1009 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 KCNAB1Q14722 419 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 SF3B3Q15393 1217 aaKnown RBP4.3□□□□□ -1.72
HERC1-215ENST00000561436 TMEM95Q3KNT9 176 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 OLFML1Q6UWY5 402 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 RAB11FIP4Q86YS3 637 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 RASGRP3Q8IV61 690 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 ANKRD18AQ8IVF6 992 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 CACNA2D3Q8IZS8 1091 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 GLIS1Q8NBF1 620 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 SLC30A5Q8TAD4 765 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 ABHD5Q8WTS1 349 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 LINC00476Q8WZB0 136 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 ZG16BQ96DA0 208 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 PTCD3Q96EY7 689 aaKnown RBP4.3□□□□□ -1.72
HERC1-215ENST00000561436 ZDHHC12Q96GR4 267 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 FAM227BQ96M60 508 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 HIST1H2AAQ96QV6 131 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 TRIM5Q9C035 493 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 SYNPO2LQ9H987 977 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 GLOD4Q9HC38 313 aa4.3□□□□□ -1.72
HERC1-215ENST00000561436 USP6P35125 1406 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 CAMTA1Q9Y6Y1 1673 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ACKR2O00590 384 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 NPC1O15118 1278 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ORC4O43929 436 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 NXPH3O95157 252 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ITGA2BP08514 1039 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 SRGAP2BP0DMP2 458 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 HKR1P10072 659 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 SRGNP10124 158 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 HSD3B1P14060 373 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 NPPBP16860 134 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 GATA3P23771 443 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 RBL1P28749 1068 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 SERPINF1P36955 418 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 MPLP40238 635 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ALDH18A1P54886 795 aaKnown RBP4.29□□□□□ -1.72
HERC1-215ENST00000561436 INHBEP58166 350 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 NANOS3P60323 173 aaKnown RBP4.29□□□□□ -1.72
HERC1-215ENST00000561436 FOXO1Q12778 655 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ZIK1Q3SY52 487 aaPredicted RBP4.29□□□□□ -1.72
HERC1-215ENST00000561436 DEPDC1Q5TB30 811 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 KLHL17Q6TDP4 642 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 RINLQ6ZS11 566 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 KCTD20Q7Z5Y7 419 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.29□□□□□ -1.72
HERC1-215ENST00000561436 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 RUBCNQ92622 972 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 C18orf8Q96DM3 657 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 PGBD1Q96JS3 809 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 AIFM2Q9BRQ8 373 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 ALG8Q9BVK2 526 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 GBA2Q9HCG7 927 aaPredicted RBP4.29□□□□□ -1.72
HERC1-215ENST00000561436 TFCP2L1Q9NZI6 479 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.29□□□□□ -1.72
HERC1-215ENST00000561436 ZNHIT2Q9UHR6 403 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 KNDC1Q76NI1 1749 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 FMN2Q9NZ56 1722 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 CPSF1Q10570 1443 aaKnown RBP4.29□□□□□ -1.72
HERC1-215ENST00000561436 PPIP5K1Q6PFW1 1433 aa4.29□□□□□ -1.72
HERC1-215ENST00000561436 TTC21BQ7Z4L5 1316 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 ABCC6O95255 1503 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 AQP12BA6NM10 295 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 SLC16A3O15427 465 aaKnown RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 PEX1O43933 1283 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 PIP5K1CO60331 668 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 ONECUT2O95948 504 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 LMNAP02545 664 aaKnown RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 ITGA5P08648 1049 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 PPP3CBP16298 524 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 MST1P26927 711 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 UQCRC1P31930 480 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 GATMP50440 423 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 SMN1Q16637 294 aaKnown RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 ZNF618Q5T7W0 954 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 ATPAF1Q5TC12 328 aaPredicted RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 VPS53Q5VIR6 699 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 MANEALQ5VSG8 457 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 ABHD17BQ5VST6 288 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 Q6ZNX1 250 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 KIAA0408Q6ZU52 694 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 USP49Q70CQ1 688 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 CCDC117Q8IWD4 279 aaPredicted RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 IZUMO1Q8IYV9 350 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 NRSN1Q8IZ57 195 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 ABRAQ8N0Z2 381 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 FSTL5Q8N475 847 aaPredicted RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 FAM109AQ8N4B1 249 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 PAF1Q8N7H5 531 aa4.28□□□□□ -1.72
HERC1-215ENST00000561436 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
HERC1-215ENST00000561436 TMEM171Q8WVE6 324 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms