RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 PUM1Q14671 1186 aaKnown RBP eCLIP7.23□□□□□ -1.25
SPG11-224ENST00000561268 BRD3Q15059 726 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 TERF2Q15554 542 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 CSRP2Q16527 193 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 MEA1Q16626 185 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 LY6G5CQ5SRR4 150 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 PM20D1Q6GTS8 502 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 TMTC1Q8IUR5 882 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 SFTPA1Q8IWL2 248 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 TRIM59Q8IWR1 403 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 BBS7Q8IWZ6 715 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 KIAA2013Q8IYS2 634 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 FAM160A2Q8N612 972 aaPredicted RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 TC2NQ8N9U0 490 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 TERB1Q8NA31 727 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 IL17RCQ8NAC3 791 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 ANKRD20A12PQ8NF67 263 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 KCNV2Q8TDN2 545 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 EEF2KMTQ96G04 330 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 P2RY11Q96G91 374 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 CNOT6LQ96LI5 555 aaKnown RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 MED10Q9BTT4 135 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 METTL14Q9HCE5 456 aaKnown RBP7.23□□□□□ -1.25
SPG11-224ENST00000561268 SPHK2Q9NRA0 654 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 SMPD4Q9NXE4 827 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 PSD3Q9NYI0 1048 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 FBXO10Q9UK96 956 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 HCN2Q9UL51 889 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 CNTN6Q9UQ52 1028 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 PPP2R2CQ9Y2T4 447 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 STARD13Q9Y3M8 1113 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 PCDHGA5Q9Y5G8 931 aa7.23□□□□□ -1.25
SPG11-224ENST00000561268 LAMA1P25391 3075 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TPRP12270 2363 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 A0A1W2PQC6 194 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 A0A1W2PQH9 124 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 ANTXRLA6NF34 631 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 PRR5-ARHGAP8B1AHC4 643 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 AKR1B15C9JRZ8 316 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 XPO1O14980 1071 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 AXIN1O15169 862 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 ADAM23O75077 832 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TULP3O75386 442 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 RPP40O75818 363 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 STC2O76061 302 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 CLSTN1O94985 981 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 KAT7O95251 611 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 APBB3O95704 486 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 PENKP01210 267 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 ACO1P21399 889 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 TBXAS1P24557 533 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 MCM3P25205 808 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 ADORA2BP29275 332 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 PLA2G4AP47712 749 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 RPL34P49207 117 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 ARHGAP8P85298 464 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 GCNT1Q02742 428 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 GAD2Q05329 585 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 IFRD2Q12894 506 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 ENPP2Q13822 863 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 SIM2Q14190 667 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 CRY1Q16526 586 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 PLK5Q496M5 336 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TEX35Q5T0J7 233 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 PEAR1Q5VY43 1037 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 PMS2CLQ68D20 193 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 MSANTD2Q6P1R3 559 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 FBXO38Q6PIJ6 1188 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TMCO3Q6UWJ1 677 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 PRR23CQ6ZRP0 262 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 RSRC2Q7L4I2 434 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 PIGZQ86VD9 579 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 CPXM2Q8N436 756 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 CEP112Q8N8E3 955 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 ANKRD52Q8NB46 1076 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 RBBP8NLQ8NC74 664 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 NETO1Q8TDF5 533 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 ERCC4Q92889 916 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 SECISBP2LQ93073 1101 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 TATDN2Q93075 761 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TMEM176AQ96HP8 235 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 HHIPQ96QV1 700 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 CDK5RAP1Q96SZ6 601 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 PNKPQ96T60 521 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TSG101Q99816 390 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 SEMA4GQ9NTN9 838 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 ARMCX3Q9UH62 379 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 LIMA1Q9UHB6 759 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 RWDD2AQ9UIY3 292 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 TSPAN16Q9UKR8 245 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 NFE2L3Q9Y4A8 694 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 MRFAP1Q9Y605 127 aa7.22□□□□□ -1.25
SPG11-224ENST00000561268 MAP1BP46821 2468 aaKnown RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 COL5A1P20908 1838 aaPredicted RBP7.22□□□□□ -1.25
SPG11-224ENST00000561268 TULP2O00295 520 aa7.21□□□□□ -1.26
SPG11-224ENST00000561268 SCAMP3O14828 347 aaKnown RBP7.21□□□□□ -1.26
SPG11-224ENST00000561268 SLC30A4O14863 429 aa7.21□□□□□ -1.26
SPG11-224ENST00000561268 IGLV3-27P01718 113 aa7.21□□□□□ -1.26
SPG11-224ENST00000561268 KLKB1P03952 638 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms