RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 DCDC5Q6ZRR9 648 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 FAM71DQ8N9W8 422 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 PNLDC1Q8NA58 520 aaKnown RBP5.12□□□□□ -1.59
PSMA4-221ENST00000560842 ZNF527Q8NB42 609 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.12□□□□□ -1.59
PSMA4-221ENST00000560842 FAM71BQ8TC56 605 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 IPO4Q8TEX9 1081 aaKnown RBP5.12□□□□□ -1.59
PSMA4-221ENST00000560842 HIC2Q96JB3 615 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 RNF26Q9BY78 433 aaPredicted RBP5.12□□□□□ -1.59
PSMA4-221ENST00000560842 TP63Q9H3D4 680 aaPredicted RBP5.12□□□□□ -1.59
PSMA4-221ENST00000560842 LRCH1Q9Y2L9 728 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 ZNF804BA4D1E1 1349 aa5.12□□□□□ -1.59
PSMA4-221ENST00000560842 M0QZQ0 153 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 BMP15O95972 392 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 IGKV2-30P06310 120 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 SRGAP2BP0DMP2 458 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 MATN1P21941 496 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 PDIA3P30101 505 aaKnown RBP5.11□□□□□ -1.59
PSMA4-221ENST00000560842 GALNSP34059 522 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 PTGER1P34995 402 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 GALNT1Q10472 559 aaPredicted RBP5.11□□□□□ -1.59
PSMA4-221ENST00000560842 SEMA3BQ13214 749 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 MFSD13AQ14CX5 517 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 TRIM60Q495X7 471 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 CERKLQ49MI3 558 aaPredicted RBP5.11□□□□□ -1.59
PSMA4-221ENST00000560842 TMEM119Q4V9L6 283 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 KLHL22Q53GT1 634 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 MEX3CQ5U5Q3 659 aaKnown RBP5.11□□□□□ -1.59
PSMA4-221ENST00000560842 PGBD2Q6P3X8 592 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 ACSM6Q6P461 480 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 TMEM65Q6PI78 240 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 VSTM1Q6UX27 236 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 SERPINA13PQ6UXR4 307 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 SKAP1Q86WV1 359 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 GALNT16Q8N428 558 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 GLMPQ8WWB7 406 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 MUL1Q969V5 352 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 MPHOSPH6Q99547 160 aaKnown RBP5.11□□□□□ -1.59
PSMA4-221ENST00000560842 USP29Q9HBJ7 922 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 DAAM1Q9Y4D1 1078 aa5.11□□□□□ -1.59
PSMA4-221ENST00000560842 CCDC187A0A096LP49 1063 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 PNMA6EA0A0J9YXQ4 647 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 J3KTA2 159 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 SYT5O00445 386 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 PIP5K1BO14986 540 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 FYB1O15117 783 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 GCATO75600 419 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 DRD1P21728 446 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 JAK3P52333 1124 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 GRM1Q13255 1194 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 CSHL1Q14406 222 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 KCNB1Q14721 858 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 ZACNQ401N2 412 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 RANBP10Q6VN20 620 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 P3H2Q8IVL5 708 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 OR52L2PQ8NGH6 319 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 SPATA3Q8NHX4 192 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 FCRL4Q96PJ5 515 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 RPS6KC1Q96S38 1066 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 CRB3Q9BUF7 120 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 GATA5Q9BWX5 397 aaPredicted RBP5.1□□□□□ -1.59
PSMA4-221ENST00000560842 OBP2BQ9NPH6 170 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 ABHD10Q9NUJ1 306 aa5.1□□□□□ -1.59
PSMA4-221ENST00000560842 LOC105369274A0A096LPK9 316 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 LOC102723532A0A0G2JNH3 316 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 AQP12BA6NM10 295 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 TMEM232C9JQI7 657 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 PPP6CO00743 305 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 TP73O15350 636 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 SFPQP23246 707 aaKnown RBP eCLIP5.09□□□□□ -1.59
PSMA4-221ENST00000560842 IGHMBP2P38935 993 aaKnown RBP5.09□□□□□ -1.59
PSMA4-221ENST00000560842 GSTM5P46439 218 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 CDK7P50613 346 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 WDR5P61964 334 aaKnown RBP5.09□□□□□ -1.59
PSMA4-221ENST00000560842 RAE1P78406 368 aaKnown RBP5.09□□□□□ -1.59
PSMA4-221ENST00000560842 FOXO1Q12778 655 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 SLC14A1Q13336 389 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 GRM4Q14833 912 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 PUM3Q15397 648 aaKnown RBP5.09□□□□□ -1.59
PSMA4-221ENST00000560842 SEC23BQ15437 767 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 PFKFB4Q16877 469 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 NRSN1Q8IZ57 195 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 OR4N4Q8N0Y3 316 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 ADGRE3Q9BY15 652 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 CDCP1Q9H5V8 836 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 MAFFQ9ULX9 164 aa5.09□□□□□ -1.59
PSMA4-221ENST00000560842 UBE2J1Q9Y385 318 aaPredicted RBP5.09□□□□□ -1.59
PSMA4-221ENST00000560842 CYP2D7A0A087X1C5 515 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 C16orf96A6NNT2 1141 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 LGALS16A8MUM7 142 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 ASNA1O43681 348 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 SKAP2O75563 359 aaPredicted RBP5.08□□□□□ -1.6
PSMA4-221ENST00000560842 CBSLP0DN79 551 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 CBSP35520 551 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 SERPINF1P36955 418 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 ALDH18A1P54886 795 aaKnown RBP5.08□□□□□ -1.6
PSMA4-221ENST00000560842 DAZAP2Q15038 168 aaPredicted RBP5.08□□□□□ -1.6
PSMA4-221ENST00000560842 AWAT1Q58HT5 328 aa5.08□□□□□ -1.6
PSMA4-221ENST00000560842 CEP78Q5JTW2 689 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms