RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 DGKIO75912 1065 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 KRT37O76014 449 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 F9P00740 461 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 INHBAP08476 426 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 FAM200BP0CF97 657 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SKIP12755 728 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 CCDC130P13994 396 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 AKAP5P24588 427 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 RBL1P28749 1068 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 PCSK1P29120 753 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 ADORA2BP29275 332 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 ALDH3A1P30838 453 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SSTR1P30872 391 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 ELK3P41970 407 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 GLUD2P49448 558 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SREBF2Q12772 1141 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 LRRC14Q15048 493 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 PAFAH1B3Q15102 231 aaKnown RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 PDK1Q15118 436 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SEPT7Q16181 437 aaKnown RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 GALNTL6Q49A17 601 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 MSS51Q4VC12 460 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 GLRA4Q5JXX5 417 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 HEATR6Q6AI08 1181 aaKnown RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 TWF2Q6IBS0 349 aaKnown RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 C1orf228Q6PIY5 440 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 NPNTQ6UXI9 565 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 FAM228AQ86W67 206 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 ANKMY2Q8IV38 441 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 TRIM42Q8IWZ5 723 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 FUKQ8N0W3 1084 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 BANPQ8N9N5 519 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 MGARPQ8TDB4 240 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SLC2A14Q8TDB8 520 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 IRGQQ8WZA9 623 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 WNT8BQ93098 351 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 OLFM3Q96PB7 478 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 CSPG4P5Q96PW8 444 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 KCTD15Q96SI1 283 aaPredicted RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 APOL6Q9BWW8 343 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 DHX35Q9H5Z1 703 aaKnown RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 LRRC4Q9HBW1 653 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 RXFP1Q9HBX9 757 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 DSEQ9UL01 958 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 CDH9Q9ULB4 789 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 HES2Q9Y543 173 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 USP3Q9Y6I4 520 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 SQORQ9Y6N5 450 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 USH1CQ9Y6N9 552 aa10.05□□□□□ -0.8
RTF1-206ENST00000560447 TDRD15B5MCY1 1934 aaKnown RBP10.05□□□□□ -0.8
RTF1-206ENST00000560447 A0A0A0MRY4 1105 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 TCRBV7S3A2A0A539 114 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 TCRBV9S1A1TA0A576 114 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 KBTBD13C9JR72 458 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 ANKRD65E5RJM6 399 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 GOLGA8MH3BSY2 632 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 DNM1LO00429 736 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 PTGESO14684 152 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 KLF11O14901 512 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 HNRNPCL1O60812 293 aaKnown RBP10.04□□□□□ -0.8
RTF1-206ENST00000560447 EDF1O60869 148 aaKnown RBP10.04□□□□□ -0.8
RTF1-206ENST00000560447 GRAP2O75791 330 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 DCTN3O75935 186 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 KRT38O76015 456 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 MT-ND3P03897 115 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 THP07101 528 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 PDGFRBP09619 1106 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 LCP1P13796 627 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 CYP2C18P33260 490 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 HTR7P34969 479 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 SULT1E1P49888 294 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 ZNF33AQ06730 810 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 SOX4Q06945 474 aaPredicted RBP10.04□□□□□ -0.8
RTF1-206ENST00000560447 CDK18Q07002 472 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 ADCY1Q08828 1119 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 BNIP1Q12981 228 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 HIC1Q14526 733 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 CA9Q16790 459 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 PPP6R3Q5H9R7 873 aaPredicted RBP10.04□□□□□ -0.8
RTF1-206ENST00000560447 PRAMEF19Q5SWL8 479 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 TTC39BQ5VTQ0 682 aaPredicted RBP10.04□□□□□ -0.8
RTF1-206ENST00000560447 MFSD14CQ5VZR4 134 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 STEAP4Q687X5 459 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 NCBP2-AS2Q69YL0 99 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 PIGZQ86VD9 579 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 SERINC5Q86VE9 423 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 OSTM1Q86WC4 334 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 LRRC6Q86X45 466 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 DEFB106AQ8N104 65 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 SIX6OS1Q8N1H7 587 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 TMEM130Q8N3G9 435 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 RAB3IL1Q8TBN0 382 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 MAGEC3Q8TD91 643 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 TFB1MQ8WVM0 346 aaKnown RBP10.04□□□□□ -0.8
RTF1-206ENST00000560447 LRCH3Q96II8 777 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 APOPT1Q96IL0 206 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 UROC1Q96N76 676 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 SPATA13Q96N96 652 aa10.04□□□□□ -0.8
RTF1-206ENST00000560447 WDR83Q9BRX9 315 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms