RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 HCN4Q9Y3Q4 1203 aa11.03□□□□□ -0.64
CRTC3-209ENST00000560320 RWDD3Q9Y3V2 267 aa11.03□□□□□ -0.64
CRTC3-209ENST00000560320 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.64
CRTC3-209ENST00000560320 A0A1W2PQH9 124 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 WDR27A2RRH5 827 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 SLC38A8A6NNN8 435 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 H7C0C1 242 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 SGK1O00141 431 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 EEF2KO00418 725 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 PRRG1O14668 218 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 TLL1O43897 1013 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 EFEMP2O95967 443 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 KRT14P02533 472 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 FYNP06241 537 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 CD48P09326 243 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 SLC2A3P11169 496 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ATF2P15336 505 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ATP2A2P16615 1042 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 RPL17P18621 184 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 L1CAMP32004 1257 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ADRA1BP35368 520 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ALDH1A3P47895 512 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ATP5OP48047 213 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 CARSP49589 748 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 GPR15P49685 360 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 VCPP55072 806 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 EIF3EP60228 445 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 OTUD4Q01804 1114 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 MMRN1Q13201 1228 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 NNTQ13423 1086 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 PTK6Q13882 451 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 RAB6CQ53S08 254 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 SDHAF4Q5VUM1 108 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 DUPD1Q68J44 220 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 RSPO2Q6UXX9 243 aaPredicted RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 BHLHA9Q7RTU4 235 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 TADA2BQ86TJ2 420 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 TAC4Q86UU9 113 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 HERC6Q8IVU3 1022 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ZDHHC14Q8IZN3 488 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 CCDC185Q8N715 623 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 CCDC89Q8N998 374 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 PDZD8Q8NEN9 1154 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ZNF461Q8TAF7 563 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ADAM32Q8TC27 787 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 FAM71BQ8TC56 605 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 DQX1Q8TE96 717 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 LRRC45Q96CN5 670 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 SERPINB11Q96P15 392 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 KCTD15Q96SI1 283 aaPredicted RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 EPAS1Q99814 870 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 HINFPQ9BQA5 517 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 FERMT1Q9BQL6 677 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 HERPUD2Q9BSE4 406 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 RAB6CQ9H0N0 254 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 GMIPQ9P107 970 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 SLC12A6Q9UHW9 1150 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 FBXW11Q9UKB1 542 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 NFU1Q9UMS0 254 aa11.02□□□□□ -0.65
CRTC3-209ENST00000560320 R3HDM2Q9Y2K5 976 aaKnown RBP11.02□□□□□ -0.65
CRTC3-209ENST00000560320 MTCL1Q9Y4B5 1905 aaKnown RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 ESYT3A0FGR9 886 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CFAP69A5D8W1 941 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 IRAK2O43187 625 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CREB3O43889 395 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 ZNF189O75820 626 aaPredicted RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 FGF18O76093 207 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 SEC31AO94979 1220 aaKnown RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 ITGAVP06756 1048 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CSH1P0DML2 217 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CSH2P0DML3 217 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 DNAJB2P25686 324 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 ACTN2P35609 894 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 ADCY8P40145 1251 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 NR2C2P49116 596 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CXCR3P49682 368 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 TPI1P60174 286 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 PITX1P78337 314 aaPredicted RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CAV1Q03135 178 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 SCAPQ12770 1279 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 PLD1Q13393 1074 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 RAB33AQ14088 237 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CA9Q16790 459 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 BEND6Q5SZJ8 279 aaPredicted RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 MSANTD2Q6P1R3 559 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 DARS2Q6PI48 645 aaKnown RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 C1orf228Q6PIY5 440 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 CEP128Q6ZU80 1094 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 C16orf59Q7L2K0 433 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 BNIPLQ7Z465 357 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 ANKS1BQ7Z6G8 1248 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 TTC9BQ8N6N2 239 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 GIPC2Q8TF65 315 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 MYLIPQ8WY64 445 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 OVCA2Q8WZ82 227 aa11.01□□□□□ -0.65
CRTC3-209ENST00000560320 NKD2Q969F2 451 aaPredicted RBP11.01□□□□□ -0.65
CRTC3-209ENST00000560320 FAF2Q96CS3 445 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms