RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CLEC4EQ9ULY5 219 aa17.47■□□□□ 0.39
HERC1-207ENST00000560316 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.47■□□□□ 0.39
HERC1-207ENST00000560316 CFAP46Q8IYW2 2715 aa17.47■□□□□ 0.39
HERC1-207ENST00000560316 TENM4Q6N022 2769 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 MYH10P35580 1976 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 PCDHGA12O60330 932 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 ADORA2BP29275 332 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 ZNF667Q5HYK9 610 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 LRRC69Q6ZNQ3 347 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 ANKS1BQ7Z6G8 1248 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 ZNF843Q8N446 348 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 PDILTQ8N807 584 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 C12orf29Q8N999 325 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 XXYLT1Q8NBI6 393 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 RBBP8NLQ8NC74 664 aaPredicted RBP17.46■□□□□ 0.39
HERC1-207ENST00000560316 ENGASEQ8NFI3 743 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 FCRL3Q96P31 734 aaPredicted RBP17.46■□□□□ 0.39
HERC1-207ENST00000560316 PCED1AQ9H1Q7 454 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 VRTNQ9H8Y1 702 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 CKAP5Q14008 2032 aa17.46■□□□□ 0.39
HERC1-207ENST00000560316 ZNF462Q96JM2 2506 aa17.46■□□□□ 0.38
HERC1-207ENST00000560316 MUC22E2RYF6 1773 aaPredicted RBP17.45■□□□□ 0.38
HERC1-207ENST00000560316 CYSRT1A8MQ03 144 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 HHLA1C9JL84 531 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 CBX4O00257 560 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 HMBSP08397 361 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 JUPP14923 745 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 GRIA4P48058 902 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 CEBPZQ03701 1054 aaKnown RBP17.45■□□□□ 0.38
HERC1-207ENST00000560316 BIRC3Q13489 604 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 TMEM215Q68D42 235 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 KLHDC10Q6PID8 442 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 SERPINA13PQ6UXR4 307 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 EPM2AIP1Q7L775 607 aaPredicted RBP17.45■□□□□ 0.38
HERC1-207ENST00000560316 NELFCDQ8IXH7 590 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 OR2T3Q8NH03 318 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 ZNF507Q8TCN5 953 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 PLEKHO2Q8TD55 490 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 BIRC7Q96CA5 298 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 LHX5Q9H2C1 402 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 NAGPAQ9UK23 515 aa17.45■□□□□ 0.38
HERC1-207ENST00000560316 PTPRQQ9UMZ3 2332 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 MAST4O15021 2626 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 EIF3DO15371 548 aaKnown RBP eCLIP17.44■□□□□ 0.38
HERC1-207ENST00000560316 FSBPO95073 299 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 FAM200BP0CF97 657 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 CTSKP43235 329 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 NDST1P52848 882 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 NCOA4Q13772 614 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 RABEP1Q15276 862 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 C6orf118Q5T5N4 469 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 CLEC20AQ6ZU45 233 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 GATAD2AQ86YP4 633 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 ZNF366Q8N895 744 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 OSGEPQ9NPF4 335 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 AK5Q9Y6K8 562 aa17.44■□□□□ 0.38
HERC1-207ENST00000560316 VPS37CA5D8V6 355 aaPredicted RBP17.43■□□□□ 0.38
HERC1-207ENST00000560316 VNN1O95497 513 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 SEMA4FO95754 770 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 CORO1AP31146 461 aaKnown RBP17.43■□□□□ 0.38
HERC1-207ENST00000560316 CHKAP35790 457 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 DNAJC3Q13217 504 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 BMT2Q1RMZ1 405 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 INAVAQ3KP66 663 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 PRAMEF14Q5SWL7 426 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 FAM173BQ6P4H8 233 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 ADAT2Q7Z6V5 191 aaKnown RBP17.43■□□□□ 0.38
HERC1-207ENST00000560316 SCD5Q86SK9 330 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 CRYBG2Q8N1P7 616 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 RASAL2Q9UJF2 1139 aa17.43■□□□□ 0.38
HERC1-207ENST00000560316 AGO1Q9UL18 857 aaKnown RBP17.43■□□□□ 0.38
HERC1-207ENST00000560316 ENC1O14682 589 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 RRP8O43159 456 aaKnown RBP17.42■□□□□ 0.38
HERC1-207ENST00000560316 TSPAN3O60637 253 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 CD27P26842 260 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 HNF1BP35680 557 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 ARID5AQ03989 594 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 TARDBPQ13148 414 aaKnown RBP eCLIP17.42■□□□□ 0.385e-8■■■■■ 30.1
HERC1-207ENST00000560316 CAMK2GQ13555 558 aaPredicted RBP17.42■□□□□ 0.38
HERC1-207ENST00000560316 EIF4HQ15056 248 aaKnown RBP17.42■□□□□ 0.38
HERC1-207ENST00000560316 DENND1CQ8IV53 801 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 LSM14AQ8ND56 463 aaKnown RBP17.42■□□□□ 0.38
HERC1-207ENST00000560316 CYB5D2Q8WUJ1 264 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 ORAI3Q9BRQ5 295 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 BTBD1Q9H0C5 482 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 PCDHA5Q9Y5H7 936 aa17.42■□□□□ 0.38
HERC1-207ENST00000560316 A0A1B0GTQ1 180 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 LRRIQ3A6PVS8 624 aaPredicted RBP17.41■□□□□ 0.38
HERC1-207ENST00000560316 C4BPAP04003 597 aaKnown RBP17.41■□□□□ 0.38
HERC1-207ENST00000560316 CYBBP04839 570 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 KIF11P52732 1056 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 ASIC1P78348 528 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 EFEMP1Q12805 493 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 E2F5Q15329 346 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 FNDC3BQ53EP0 1204 aaKnown RBP17.41■□□□□ 0.38
HERC1-207ENST00000560316 FAM26FQ5R3K3 315 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 TADA2BQ86TJ2 420 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 DDI1Q8WTU0 396 aa17.41■□□□□ 0.38
HERC1-207ENST00000560316 CNDP2Q96KP4 475 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms