RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 BPIFB4P59827 614 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 TYRO3Q06418 890 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 PDCLQ13371 301 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 DRAP1Q14919 205 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 TRIP4Q15650 581 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 CRY1Q16526 586 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 HSF5Q4G112 596 aaPredicted RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 CDKAL1Q5VV42 579 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 TAF3Q5VWG9 929 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 EGFLAMQ63HQ2 1017 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 NUGGCQ68CJ6 796 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 OR6B2Q6IFH4 312 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 CAVIN1Q6NZI2 390 aaKnown RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 MSANTD2Q6P1R3 559 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SLC47A2Q86VL8 602 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 CHPFQ8IZ52 775 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 PHTF2Q8N3S3 785 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 CPXM2Q8N436 756 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 AOPEPQ8N6M6 819 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 C1orf131Q8NDD1 294 aaKnown RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 IPO4Q8TEX9 1081 aaKnown RBP8.54□□□□□ -1.04
SNX1-207ENST00000559401 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 HMGB4Q8WW32 186 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SERPINB11Q96P15 392 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SLC4A5Q9BY07 1137 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 PLCB1Q9NQ66 1216 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 COX16Q9P0S2 106 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 CYTH4Q9UIA0 394 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 NAALADL1Q9UQQ1 740 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 INVSQ9Y283 1065 aa8.54□□□□□ -1.04
SNX1-207ENST00000559401 SPAG17Q6Q759 2223 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 RIF1Q5UIP0 2472 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 CCDC163A0A0D9SF12 145 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 TYW5A2RUC4 315 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 PAPSS1O43252 624 aaPredicted RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 PENKP01210 267 aaPredicted RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 APOEP02649 317 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 HOXB2P14652 356 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 UCHL3P15374 230 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 NTSR1P30989 418 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 CLCN1P35523 988 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 COPB1P53618 953 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 SNX16P57768 344 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 YWHAZP63104 245 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 ARID5AQ03989 594 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 KCNMA1Q12791 1236 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 ELF2Q15723 593 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 MPPE1Q53F39 396 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 USP39Q53GS9 565 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 ADGRF1Q5T601 910 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 KLHDC7AQ5VTJ3 777 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 FYB2Q5VWT5 728 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 TMEM92Q6UXU6 159 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 CACNA2D4Q7Z3S7 1137 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 ANKS1BQ7Z6G8 1248 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 TAC4Q86UU9 113 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 UNC45BQ8IWX7 931 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 FAM160A2Q8N612 972 aaPredicted RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 MDGA1Q8NFP4 955 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 DQX1Q8TE96 717 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 UCMAQ8WVF2 138 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 RNF34Q969K3 372 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 PPP1R13BQ96KQ4 1090 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 SPAG5Q96R06 1193 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 CPXM1Q96SM3 734 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 CIPCQ9C0C6 399 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 NAT10Q9H0A0 1025 aaKnown RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 FAM204AQ9H8W3 233 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 POPDC2Q9HBU9 364 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 NLRC4Q9NPP4 1024 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 FAM207AQ9NSI2 230 aaPredicted RBP8.53□□□□□ -1.04
SNX1-207ENST00000559401 CACNA2D2Q9NY47 1150 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 TMEM63CQ9P1W3 806 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 STIM2Q9P246 746 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 TJP2Q9UDY2 1190 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
SNX1-207ENST00000559401 MYO18AQ92614 2054 aaKnown RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 A0A0A0MRY4 1105 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 GOLGA6L7A0A1B0GV03 622 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 PRRT4C9JH25 899 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 F8VZ95 297 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 DCLK1O15075 740 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 MAP3K13O43283 966 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 ACSL4O60488 711 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 TBL1XO60907 577 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 ADAM23O75077 832 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 GRAP2O75791 330 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 GFPT2O94808 682 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 LATS1O95835 1130 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 FYNP06241 537 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 RETP07949 1114 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 CISD3P0C7P0 127 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 HNRNPLP14866 589 aaKnown RBP eCLIP8.52□□□□□ -1.05
SNX1-207ENST00000559401 CYP11B1P15538 503 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 RPL34P49207 117 aaKnown RBP8.52□□□□□ -1.05
SNX1-207ENST00000559401 KLK7P49862 253 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 ZNF445P59923 1031 aa8.52□□□□□ -1.05
SNX1-207ENST00000559401 POLR2FP61218 127 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms