RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PYCARDQ9ULZ3 195 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 PPP2R2CQ9Y2T4 447 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 CPQQ9Y646 472 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 PIEZO1Q92508 2521 aa15.43■□□□□ 0.06
SNRPA1-207ENST00000559309 C2CD4DB7Z1M9 353 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 CAPN9O14815 690 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 LRCH4O75427 683 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 ECI2O75521 394 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 STC2O76061 302 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 PROSCO94903 275 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 LATS1O95835 1130 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 F9P00740 461 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 KLKB1P03952 638 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 SDC4P31431 198 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 PCK1P35558 622 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 AVPR1AP37288 418 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 KPNA1P52294 538 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 RNASE9P60153 205 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 FCHO2Q0JRZ9 810 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 HTR4Q13639 388 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 PIGHQ14442 188 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 DCUN1D2Q6PH85 259 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 SLFN11Q7Z7L1 901 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 TXLNBQ8N3L3 684 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 RNF10Q8N5U6 811 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 CELF5Q8N6W0 485 aaKnown RBP15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 LRRC57Q8N9N7 239 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 TPCN2Q8NHX9 752 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 ELSPBP1Q96BH3 223 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 PLD4Q96BZ4 506 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 TRPC7Q9HCX4 862 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 ANLNQ9NQW6 1124 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 GKN1Q9NS71 199 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 ARHGEF38Q9NXL2 777 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 CTTNBP2NLQ9P2B4 639 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 ANAPC7Q9UJX3 599 aa15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 ARIH1Q9Y4X5 557 aaPredicted RBP15.42■□□□□ 0.06
SNRPA1-207ENST00000559309 COL4A3Q01955 1670 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 M0QYT0 321 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 LEFTY2O00292 366 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 MSI1O43347 362 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 CKMP06732 381 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 MBL2P11226 248 aaPredicted RBP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 RDXP35241 583 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 SULT1E1P49888 294 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 ATXN1P54253 815 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 SCAPQ12770 1279 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 KIF5AQ12840 1032 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 RNF43Q68DV7 783 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 C11orf63Q6NUN7 778 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 DDX42Q86XP3 938 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 ADAM32Q8TC27 787 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 FAM172AQ8WUF8 416 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 FGF14Q92915 247 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 NTAN1Q96AB6 310 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 E2F7Q96AV8 911 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 TRIM10Q9UDY6 481 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 IP6K2Q9UHH9 426 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 FAM50BQ9Y247 325 aa15.41■□□□□ 0.06
SNRPA1-207ENST00000559309 E2F8A0AVK6 867 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 MYO1FO00160 1098 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 TBX4P57082 545 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 SLC25A11Q02978 314 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 ZP2Q05996 745 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 BRMS1LQ5PSV4 323 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 TANGO2Q6ICL3 276 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 PARM1Q6UWI2 310 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 VITQ6UXI7 678 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 RSRC2Q7L4I2 434 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 MFSD6LQ8IWD5 586 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 ADHFE1Q8IWW8 467 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 PLCD3Q8N3E9 789 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 SH3RF2Q8TEC5 729 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 CD101Q93033 1021 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 NXPE3Q969Y0 559 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 ACSF2Q96CM8 615 aaPredicted RBP15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 BTBD6Q96KE9 485 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 NCAPGQ9BPX3 1015 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 PLA2G2FQ9BZM2 168 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 SMG9Q9H0W8 520 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 DDIT4Q9NX09 232 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 RASAL2Q9UJF2 1139 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 NR2E1Q9Y466 385 aa15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 TCF20Q9UGU0 1960 aaKnown RBP15.4■□□□□ 0.06
SNRPA1-207ENST00000559309 SLC12A8A0AV02 714 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 ARNTLO00327 626 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 BUB1BO60566 1050 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 PSMA2P25787 234 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 GBP1P32455 592 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 GBP2P32456 591 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 VIPR2P41587 438 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 AIF1P55008 147 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 ATP11AP98196 1134 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 NRG1Q02297 640 aaPredicted RBP15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 SEMA3BQ13214 749 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 C5orf22Q49AR2 442 aa15.39■□□□□ 0.05
SNRPA1-207ENST00000559309 NUGGCQ68CJ6 796 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms