RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 USP51Q70EK9 711 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 LCORLQ8N3X6 602 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 PNPLA1Q8N8W4 532 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 KTI12Q96EK9 354 aaPredicted RBP12.43□□□□□ -0.42
CASC4-208ENST00000559151 LENG8Q96PV6 779 aaPredicted RBP12.43□□□□□ -0.42
CASC4-208ENST00000559151 ZHX3Q9H4I2 956 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 RMI1Q9H9A7 625 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 PLEKHA2Q9HB19 425 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 DUSP22Q9NRW4 184 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 PI4KBQ9UBF8 816 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 RCE1Q9Y256 329 aa12.43□□□□□ -0.42
CASC4-208ENST00000559151 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 TJP3O95049 919 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 ZNF37AP17032 561 aaPredicted RBP12.42□□□□□ -0.42
CASC4-208ENST00000559151 IGHMBP2P38935 993 aaKnown RBP12.42□□□□□ -0.42
CASC4-208ENST00000559151 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
CASC4-208ENST00000559151 MAPK7Q13164 816 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 PLAC9Q5JTB6 97 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 ACSM6Q6P461 480 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 RSRC2Q7L4I2 434 aaKnown RBP12.42□□□□□ -0.42
CASC4-208ENST00000559151 RASGRP2Q7LDG7 609 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 PEG10Q86TG7 708 aaKnown RBP12.42□□□□□ -0.42
CASC4-208ENST00000559151 REEP2Q9BRK0 252 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 VPS4AQ9UN37 437 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 TMEM98Q9Y2Y6 226 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 PCDHA10Q9Y5I2 948 aa12.42□□□□□ -0.42
CASC4-208ENST00000559151 MAST3O60307 1309 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 HMGB1P1B2RPK0 211 aaPredicted RBP12.41□□□□□ -0.42
CASC4-208ENST00000559151 NKX2-8O15522 239 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 MBD4O95243 580 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 CD4P01730 458 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 ATP1A3P13637 1013 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 BLOC1S1P78537 153 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 TXNL4AP83876 142 aaKnown RBP12.41□□□□□ -0.42
CASC4-208ENST00000559151 PTPAQ15257 358 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
CASC4-208ENST00000559151 SH3RF3Q8TEJ3 882 aaPredicted RBP12.41□□□□□ -0.42
CASC4-208ENST00000559151 HVCN1Q96D96 273 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 GPR63Q9BZJ6 419 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 SERTAD4Q9NUC0 356 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 TMLHEQ9NVH6 421 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 BAG5Q9UL15 447 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 SLC12A4Q9UP95 1085 aa12.41□□□□□ -0.42
CASC4-208ENST00000559151 TMIGD3P0DMS9 266 aaPredicted RBP12.4□□□□□ -0.42
CASC4-208ENST00000559151 VAMP2P63027 116 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 CBFBQ13951 182 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 DCTN1Q14203 1278 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 MIIPQ5JXC2 388 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 L1TD1Q5T7N2 865 aaKnown RBP12.4□□□□□ -0.42
CASC4-208ENST00000559151 SLC2A12Q8TD20 617 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 ARHGAP39Q9C0H5 1083 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 UNC45AQ9H3U1 944 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 SNX15Q9NRS6 342 aa12.4□□□□□ -0.42
CASC4-208ENST00000559151 MBD3L5A6NJ08 208 aaPredicted RBP12.39□□□□□ -0.43
CASC4-208ENST00000559151 H0YIZ8 118 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 SUV39H1O43463 412 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 PRAMEF2O60811 474 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 EBLN1P0CF75 366 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 FPR3P25089 353 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 GRK5P34947 590 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 RAE1P78406 368 aaKnown RBP12.39□□□□□ -0.43
CASC4-208ENST00000559151 LSM12Q3MHD2 195 aaKnown RBP12.39□□□□□ -0.43
CASC4-208ENST00000559151 ATG16L1Q676U5 607 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 SENP7Q9BQF6 1050 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 USP29Q9HBJ7 922 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
CASC4-208ENST00000559151 MAP3K20Q9NYL2 800 aaKnown RBP12.39□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3DA0A087WVF3 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3IA0A087WXS9 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3EA0A087X179 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3KA0A087X1G2 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 VWA3AA6NCI4 1184 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3BA6NDS4 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3FA6NER0 549 aaPredicted RBP12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3LB9A6J9 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 PDE8BO95263 885 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3HP0C7X1 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 ELF1P32519 619 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 CCDC15Q0P6D6 951 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 LMAN2Q12907 356 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 WDR78Q5VTH9 848 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3GQ6DHY5 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3CQ6IPX1 549 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 WDR53Q7Z5U6 358 aaPredicted RBP12.38□□□□□ -0.43
CASC4-208ENST00000559151 TBC1D3Q8IZP1 549 aaPredicted RBP12.38□□□□□ -0.43
CASC4-208ENST00000559151 FSIP1Q8NA03 581 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 PCYOX1LQ8NBM8 494 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 ABHD11Q8NFV4 315 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 RRP36Q96EU6 259 aaKnown RBP12.38□□□□□ -0.43
CASC4-208ENST00000559151 TRMT61AQ96FX7 289 aaKnown RBP12.38□□□□□ -0.43
CASC4-208ENST00000559151 HERC2P3Q9BVR0 1158 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 CINPQ9BW66 212 aaPredicted RBP12.38□□□□□ -0.43
CASC4-208ENST00000559151 FSD1LQ9BXM9 530 aa12.38□□□□□ -0.43
CASC4-208ENST00000559151 LINC00473A8K010 186 aa12.37□□□□□ -0.43
CASC4-208ENST00000559151 MBPP02686 304 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms