RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 ACAP1Q15027 740 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 HADHQ16836 314 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ARL13BQ3SXY8 428 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ZC3H12AQ5D1E8 599 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 BRMS1LQ5PSV4 323 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 SH3PXD2AQ5TCZ1 1133 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 OTUD1Q5VV17 481 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 NUGGCQ68CJ6 796 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 C11orf63Q6NUN7 778 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 CC2D1AQ6P1N0 951 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF662Q6ZS27 426 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 MTSS1LQ765P7 747 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 DAAM2Q86T65 1068 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 FAM131BQ86XD5 332 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 YAF2Q8IY57 180 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 SYCE1Q8N0S2 351 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PLCD3Q8N3E9 789 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 RNF10Q8N5U6 811 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 NIPA2Q8N8Q9 360 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ATP6V0D2Q8N8Y2 350 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 CENPIQ92674 756 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 USP13Q92995 863 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 NT5C3BQ969T7 300 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 E2F7Q96AV8 911 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PGAP3Q96FM1 320 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 RPGRIP1Q96KN7 1286 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ZFRQ96KR1 1074 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ZSWIM3Q96MP5 696 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ASB16Q96NS5 453 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 KLF16Q9BXK1 252 aaPredicted RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 DCLK3Q9C098 648 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 WDCPQ9H6R7 721 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 TRPV4Q9HBA0 871 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 ZFP14Q9HCL3 533 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 GKN1Q9NS71 199 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PIGVQ9NUD9 493 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 TRMT1Q9NXH9 659 aaKnown RBP6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 EPS15L1Q9UBC2 864 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 TRIM10Q9UDY6 481 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 CCL26Q9Y258 94 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 DUSP10Q9Y6W6 482 aa6.86□□□□□ -1.31
CHRNA3-204ENST00000559002 PRUNE2Q8WUY3 3088 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 EYSQ5T1H1 3165 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 USP27XA6NNY8 438 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 HEPACAM2A8MVW5 462 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 KIF5CO60282 957 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 BUB1BO60566 1050 aaPredicted RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 LRCH4O75427 683 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 PALMO75781 387 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 STC2O76061 302 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ENDOD1O94919 500 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 TNNT1P13805 278 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 IL9P15248 144 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 MSNP26038 577 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 MIPP30301 263 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 CORO1AP31146 461 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 PCK1P35558 622 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 VIPR2P41587 438 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 IFNAR2P48551 515 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC11A2P49281 568 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 CXCR3P49682 368 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 KCNQ1P51787 676 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ATXN1P54253 815 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 HDAC4P56524 1084 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 PPP2R5DQ14738 602 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF77Q15935 545 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ZFYVE27Q5T4F4 411 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 CHSY1Q86X52 802 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 DENND1CQ8IV53 801 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 CCAR2Q8N163 923 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 C17orf53Q8N3J3 647 aaPredicted RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 TRIM58Q8NG06 486 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 KIAA1524Q8TCG1 905 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 BPIFB1Q8TDL5 484 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC39A13Q96H72 371 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 BTN2A3PQ96KV6 586 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 FCRL2Q96LA5 508 aaPredicted RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 DDX50Q9BQ39 737 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 KXD1Q9BQD3 176 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 TKTL2Q9H0I9 626 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 THG1LQ9NWX6 298 aaKnown RBP6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 OBP2AQ9NY56 170 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 PCSK1NQ9UHG2 260 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 SALL4Q9UJQ4 1053 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 USP18Q9UMW8 372 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF510Q9Y2H8 683 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ZKSCAN5Q9Y2L8 839 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 GREB1Q4ZG55 1949 aa6.85□□□□□ -1.31
CHRNA3-204ENST00000559002 ZNF638Q14966 1978 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 C2orf16Q68DN1 1984 aa6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 E2F8A0AVK6 867 aa6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 TYW5A2RUC4 315 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 GRID2IPA4D2P6 1211 aa6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 KCNU1A8MYU2 1149 aa6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 SLC9A3R1O14745 358 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 SCAMP3O14828 347 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-204ENST00000559002 PSTPIP1O43586 416 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms