RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 TSPAN1O60635 241 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 H2AFYO75367 372 aaKnown RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 KRT36O76013 467 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 SERPINA6P08185 405 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 CD48P09326 243 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 HCAR3P49019 387 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 MRPS5P82675 430 aaKnown RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 SCAPQ12770 1279 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 RCN2Q14257 317 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 FAM102AQ5T9C2 384 aaPredicted RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 FOXB2Q5VYV0 432 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 RINLQ6ZS11 566 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 CCDC117Q8IWD4 279 aaPredicted RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 SCML4Q8N228 414 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PCDH19Q8TAB3 1148 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ELMO3Q96BJ8 720 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 HHIPL1Q96JK4 782 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 SNX27Q96L92 541 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 SRPK1Q96SB4 655 aaKnown RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 MCMBPQ9BTE3 642 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 KATNBL1Q9H079 304 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 NRDE2Q9H7Z3 1164 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 SLC17A7Q9P2U7 560 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 HESX1Q9UBX0 185 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 IKBKGQ9Y6K9 419 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 FAM170AA1A519 330 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 C9IYK1 514 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 H0Y3Z8 333 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 AP3B1O00203 1094 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 OPHN1O60890 802 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 TM7SF2O76062 418 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ITGB3P05106 788 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 BPGMP07738 259 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PDHA1P08559 390 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 IQCF3P0C7M6 154 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PNPLA4P41247 253 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PSMC4P43686 418 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 CDK7P50613 346 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PRKAA2P54646 552 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 CDH6P55285 790 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 GJA9P57773 515 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ACTR3P61158 418 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PLCB3Q01970 1234 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 FAAP100Q0VG06 881 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ILF2Q12905 390 aaKnown RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 EFTUD2Q15029 972 aaKnown RBP eCLIP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 PAFAH1B3Q15102 231 aaKnown RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 LLGL1Q15334 1064 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 HSDL1Q3SXM5 330 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 EFCAB12Q6NXP0 572 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 LRRC8BQ6P9F7 803 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 FASTKD5Q7L8L6 764 aaKnown RBP6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ZBTB33Q86T24 672 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 CCDC110Q8TBZ0 833 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 UCMAQ8WVF2 138 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 KCTD13Q8WZ19 329 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 NLRP4Q96MN2 994 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 FAM118BQ9BPY3 351 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 TCHPQ9BT92 498 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ZWILCHQ9H900 591 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 DNAJC28Q9NX36 388 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 GGA3Q9NZ52 723 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 IGSF9Q9P2J2 1179 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 TSPAN16Q9UKR8 245 aa6.67□□□□□ -1.34
AC087516.2-201ENST00000558963 ERI2A8K979 691 aaKnown RBP6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 COPEO14579 308 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 HGSO14964 777 aaPredicted RBP6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 MAP3K13O43283 966 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 GLRA3O75311 464 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 FKBP6O75344 327 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 GSRP00390 522 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 IFNB1P01574 187 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 ESRRAP11474 423 aaPredicted RBP6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 KCNE1P15382 129 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 PDGFRAP16234 1089 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 GRK2P25098 689 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 SERPINB3P29508 390 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 GJC1P36383 396 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 HADHAP40939 763 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 POLD2P49005 469 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 RPS6KA3P51812 740 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 NDST1P52848 882 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 CACNA2D1P54289 1103 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 BCAT1P54687 386 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 HDAC4P56524 1084 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 GAD2Q05329 585 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 SEPT7Q16181 437 aaKnown RBP6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 ZNF792Q3KQV3 632 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 SH2D4BQ5SQS7 431 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 FAXCQ5TGI0 409 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 DPH6Q7L8W6 267 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 PHLDB2Q86SQ0 1253 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 SDCCAG8Q86SQ7 713 aaPredicted RBP6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 TMEM126BQ8IUX1 230 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 ANKMY2Q8IV38 441 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 VPS52Q8N1B4 723 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 TRPM4Q8TD43 1214 aa6.66□□□□□ -1.34
AC087516.2-201ENST00000558963 WDR60Q8WVS4 1066 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms