RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 PCDHGC3Q9UN70 934 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
AP4E1-202ENST00000558439 USP2O75604 605 aaPredicted RBP15.94■□□□□ 0.14
AP4E1-202ENST00000558439 LYPLA1O75608 230 aaPredicted RBP15.94■□□□□ 0.14
AP4E1-202ENST00000558439 SLC12A1Q13621 1099 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 DCAF4L1Q3SXM0 396 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 SV2CQ496J9 727 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 MTHFD1LQ6UB35 978 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 PLPPR4Q7Z2D5 763 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 CCDC134Q9H6E4 229 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 GOLGA2P5Q9HBQ8 144 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 SAR1AQ9NR31 198 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.94■□□□□ 0.14
AP4E1-202ENST00000558439 TAGLN3Q9UI15 199 aa15.94■□□□□ 0.14
AP4E1-202ENST00000558439 SMCHD1A6NHR9 2005 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 CPA3P15088 417 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 PSMB4P28070 264 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 YWHAZP63104 245 aaKnown RBP15.93■□□□□ 0.14
AP4E1-202ENST00000558439 TCEAL1Q15170 157 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 WASHC2DQ5SRD0 308 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ADGRD1Q6QNK2 874 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 VPS39Q96JC1 886 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 UGT1A9O60656 530 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ZMPSTE24O75844 475 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ICAM3P32942 547 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 SLC1A6P48664 564 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 OASLQ15646 514 aaKnown RBP15.93■□□□□ 0.14
AP4E1-202ENST00000558439 PDCD2Q16342 344 aaPredicted RBP15.93■□□□□ 0.14
AP4E1-202ENST00000558439 BTBD8Q5XKL5 378 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ISLR2Q6UXK2 745 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 FAM96AQ9H5X1 160 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 WDCPQ9H6R7 721 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 UGT1A7Q9HAW7 530 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 UGT1A10Q9HAW8 530 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 UGT1A8Q9HAW9 530 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ADARB2Q9NS39 739 aaKnown RBP15.93■□□□□ 0.14
AP4E1-202ENST00000558439 EPS15L1Q9UBC2 864 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 CA9Q16790 459 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 PRAMEF19Q5SWL8 479 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ST13P4Q8IZP2 240 aaPredicted RBP15.93■□□□□ 0.14
AP4E1-202ENST00000558439 RNF148Q8N7C7 305 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 SCG3Q8WXD2 468 aaKnown RBP15.93■□□□□ 0.14
AP4E1-202ENST00000558439 ACSS2Q9NR19 701 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 KRT82Q9NSB4 513 aa15.93■□□□□ 0.14
AP4E1-202ENST00000558439 CLDN5O00501 218 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 STX1BP61266 288 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 SLC10A6Q3KNW5 377 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 SCARA3Q6AZY7 606 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 TRMT10BQ6PF06 316 aaKnown RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 TMPRSS6Q8IU80 811 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 SLC44A1Q8WWI5 657 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 CMTM5Q96DZ9 223 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 NUF2Q9BZD4 464 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 ATXN3LQ9H3M9 355 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 DENND2DQ9H6A0 471 aaPredicted RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 TPP1O14773 563 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 SOX11P35716 441 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 TPD52P55327 224 aaPredicted RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 ZNF280AP59817 542 aaPredicted RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 MRPS35P82673 323 aaKnown RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 SLC25A3Q00325 362 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 UBAP2LQ14157 1087 aaKnown RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 HABP4Q5JVS0 413 aaKnown RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 SLC27A1Q6PCB7 646 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 C4orf22Q6V702 233 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 UNC5AQ6ZN44 842 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 PABPC5Q96DU9 382 aaKnown RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 PRDM12Q9H4Q4 367 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 LAMB1P07942 1786 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 PMLP29590 882 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 NUDT2P50583 147 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 MGAT5Q09328 741 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 RIPK1Q13546 671 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 AP1ARQ63HQ0 302 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 LAYNQ6UX15 382 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 IZUMO2Q6UXV1 221 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 C15orf39Q6ZRI6 1047 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 TNS4Q8IZW8 715 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 OR52K1Q8NGK4 314 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 ZNF395Q9H8N7 513 aaPredicted RBP15.92■□□□□ 0.14
AP4E1-202ENST00000558439 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 DCDC2Q9UHG0 476 aa15.92■□□□□ 0.14
AP4E1-202ENST00000558439 DCXO43602 365 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 KIF19Q2TAC6 998 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 TCHHL1Q5QJ38 904 aaPredicted RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 DRICH1Q6PGQ1 229 aaPredicted RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 PIGZQ86VD9 579 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 PYROXD2Q8N2H3 581 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 MIEF2Q96C03 454 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 CLPTM1LQ96KA5 538 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 EBNA1BP2Q99848 306 aaKnown RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 LRMDAQ9H2I8 198 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 MAN1C1Q9NR34 630 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 ARHGEF3Q9NR81 526 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 THAP1Q9NVV9 213 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 KIF1CO43896 1103 aaKnown RBP15.91■□□□□ 0.14
AP4E1-202ENST00000558439 TCEA3O75764 348 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 B3GAT3O94766 335 aa15.91■□□□□ 0.14
AP4E1-202ENST00000558439 DEFB107AQ8IZN7 70 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms