RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 WASH3PC4AMC7 463 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 SLC30A4O14863 429 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 CAVIN2O95810 425 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 CISD3P0C7P0 127 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 ANP32AP39687 249 aaKnown RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 USP8P40818 1118 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 P2RY2P41231 377 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 MTIF2P46199 727 aaKnown RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 HARS2P49590 506 aaKnown RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 MFAP3P55082 362 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 TRIP4Q15650 581 aaPredicted RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 TPD52L1Q16890 204 aaPredicted RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 GEN1Q17RS7 908 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 PLA2G2CQ5R387 149 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 KIAA1211LQ6NV74 962 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 CYP2U1Q7Z449 544 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 TMEFF1Q8IYR6 380 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 GOLGA1Q92805 767 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 CLSTN2Q9H4D0 955 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 ACP6Q9NPH0 428 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 VPS45Q9NRW7 570 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 ABCC13Q9NSE7 274 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 CLEC4EQ9ULY5 219 aa12.45□□□□□ -0.42
HERC1-202ENST00000558324 HBS1LQ9Y450 684 aaKnown RBP12.45□□□□□ -0.42
HERC1-202ENST00000558324 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
HERC1-202ENST00000558324 A0A1W2PQF6 199 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 BCLAF3A2AJT9 711 aaKnown RBP12.44□□□□□ -0.42
HERC1-202ENST00000558324 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
HERC1-202ENST00000558324 THAP12O43422 761 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
HERC1-202ENST00000558324 LTFP02788 710 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 SLC9A1P19634 815 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 ARHGAP44Q17R89 818 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 MAP7D1Q3KQU3 841 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 DPCR1Q3MIW9 517 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 HSP90AA4PQ58FG1 418 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 IL31Q6EBC2 164 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 DENND1BQ6P3S1 775 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 TRIM65Q6PJ69 517 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 LPCAT2Q7L5N7 544 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 CPXM2Q8N436 756 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 DEFB119Q8N690 84 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 MLKLQ8NB16 471 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
HERC1-202ENST00000558324 IRGQQ8WZA9 623 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 PIGKQ92643 395 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 FAM149B1Q96BN6 582 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 CIPCQ9C0C6 399 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 MBD1Q9UIS9 605 aaPredicted RBP12.44□□□□□ -0.42
HERC1-202ENST00000558324 FBXO10Q9UK96 956 aa12.44□□□□□ -0.42
HERC1-202ENST00000558324 CEP250Q9BV73 2442 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 PATE3B3GLJ2 98 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 NCAM1P13591 858 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 NDUFV2P19404 249 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 GNA15P30679 374 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 PTGER3P43115 390 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 STPG1Q5TH74 334 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 MSANTD2Q6P1R3 559 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 KIAA1324Q6UXG2 1013 aaKnown RBP12.43□□□□□ -0.42
HERC1-202ENST00000558324 GBP6Q6ZN66 633 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 ANKS1BQ7Z6G8 1248 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 IRF2BP1Q8IU81 584 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 FAM217AQ8IXS0 508 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 SCML4Q8N228 414 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 SORCS1Q8WY21 1168 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 HSFY1Q96LI6 401 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 GABRG3Q99928 467 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 NUP62CLQ9H1M0 184 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 CD93Q9NPY3 652 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 CYP8B1Q9UNU6 501 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 CNTN6Q9UQ52 1028 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 SLC27A6Q9Y2P4 619 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 STON1Q9Y6Q2 735 aa12.43□□□□□ -0.42
HERC1-202ENST00000558324 GOLGA6L7A0A1B0GV03 622 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 BECN2A8MW95 431 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 MED7O43513 233 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 FBXO21O94952 628 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 HOXD9P28356 352 aaPredicted RBP12.42□□□□□ -0.42
HERC1-202ENST00000558324 IL12RB1P42701 662 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 GPD2P43304 727 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 SGSHP51688 502 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 TBX4P57082 545 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 RPL6Q02878 288 aaKnown RBP12.42□□□□□ -0.42
HERC1-202ENST00000558324 ARID5AQ03989 594 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 BYSLQ13895 437 aaKnown RBP12.42□□□□□ -0.42
HERC1-202ENST00000558324 STARD3Q14849 445 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 EXOC3L4Q17RC7 722 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 MPPE1Q53F39 396 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 PPM1JQ5JR12 505 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 ADGRF1Q5T601 910 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 RNF43Q68DV7 783 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 RFWD3Q6PCD5 774 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 ENOSF1Q7L5Y1 443 aa12.42□□□□□ -0.42
HERC1-202ENST00000558324 CACUL1Q86Y37 369 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms