RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 E2F5Q15329 346 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 UAP1L1Q3KQV9 507 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 ISM2Q6H9L7 571 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 TMEM270Q6UE05 265 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 RABEPKQ7Z6M1 372 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 FMNL3Q8IVF7 1028 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 PPM1KQ8N3J5 372 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 CPXM2Q8N436 756 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 UBR7Q8N806 425 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 UBA3Q8TBC4 463 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 DDI1Q8WTU0 396 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 NDRG1Q92597 394 aaKnown RBP15.31■□□□□ 0.04
SHMT2-235ENST00000557740 CD248Q9HCU0 757 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 MAN1B1Q9UKM7 699 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 KIAA1257Q9ULG3 409 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 STON1Q9Y6Q2 735 aa15.31■□□□□ 0.04
SHMT2-235ENST00000557740 MYO18AQ92614 2054 aaKnown RBP15.31■□□□□ 0.04
SHMT2-235ENST00000557740 IGHV1OR15-9A0A0B4J2B8 117 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 BICDL2A1A5D9 508 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 CDX4O14627 284 aaPredicted RBP15.3■□□□□ 0.04
SHMT2-235ENST00000557740 PAEPP09466 180 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 MAPK8P45983 427 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 DUOXA1Q1HG43 343 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 SH3PXD2AQ5TCZ1 1133 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 DEFB119Q8N690 84 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 CEP76Q8TAP6 659 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 NELFBQ8WX92 580 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 EDEM1Q92611 657 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 P2RY11Q96G91 374 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 MRGPRX1Q96LB2 322 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 HSPA12BQ96MM6 686 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 TMEM74BQ9NUR3 256 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 PILRBQ9UKJ0 227 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 HBS1LQ9Y450 684 aaKnown RBP15.3■□□□□ 0.04
SHMT2-235ENST00000557740 PCDHB4Q9Y5E5 795 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 CEP295Q9C0D2 2601 aa15.3■□□□□ 0.04
SHMT2-235ENST00000557740 NUP205Q92621 2012 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 WASH3PC4AMC7 463 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 M0QYV0 167 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 PMM2O15305 246 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 SYNCRIPO60506 623 aaKnown RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 NDUFS2O75306 463 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 LCP1P13796 627 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 CD44P16070 742 aaKnown RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ENGP17813 658 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ATXN3P54252 364 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ZNF445P59923 1031 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ARID5AQ03989 594 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ZNF252P-AS1Q0IIN9 211 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 EIF4HQ15056 248 aaKnown RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 TRIP4Q15650 581 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 GEN1Q17RS7 908 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 PEAR1Q5VY43 1037 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 BSPRYQ5W0U4 402 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 SLC23A3Q6PIS1 610 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 LCLAT1Q6UWP7 414 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 BHLHA9Q7RTU4 235 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 FAM217AQ8IXS0 508 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ELOA2Q8IYF1 753 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 KCTD13Q8WZ19 329 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 PIWIL1Q96J94 861 aaKnown RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 SLC2A11Q9BYW1 496 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 CIPCQ9C0C6 399 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 SLC6A17Q9H1V8 727 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 CNGB3Q9NQW8 809 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 THAP10Q9P2Z0 257 aaPredicted RBP15.29■□□□□ 0.04
SHMT2-235ENST00000557740 CTNND2Q9UQB3 1225 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 GON4LQ3T8J9 2241 aa15.29■□□□□ 0.04
SHMT2-235ENST00000557740 PLXND1Q9Y4D7 1925 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 YJEFN3A6XGL0 299 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 E7ENQ6 273 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 GIPC1O14908 333 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 P4HA2O15460 535 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 MSI1O43347 362 aaKnown RBP15.28■□□□□ 0.04
SHMT2-235ENST00000557740 SERPINF2P08697 491 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 CSRP1P21291 193 aaKnown RBP15.28■□□□□ 0.04
SHMT2-235ENST00000557740 BRD2P25440 801 aaKnown RBP15.28■□□□□ 0.04
SHMT2-235ENST00000557740 RGS7P49802 495 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 ZNF132P52740 706 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 SHC2P98077 582 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 STILQ15468 1287 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 ST3GAL2Q16842 350 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 FUT11Q495W5 492 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 PKDCCQ504Y2 493 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 SCML4Q8N228 414 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 TRIML1Q8N9V2 468 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 RBBP8NLQ8NC74 664 aaPredicted RBP15.28■□□□□ 0.04
SHMT2-235ENST00000557740 TFAP2BQ92481 460 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 GOLGA1Q92805 767 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 GTPBP2Q9BX10 602 aaKnown RBP15.28■□□□□ 0.04
SHMT2-235ENST00000557740 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 ELOVL2Q9NXB9 296 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 SLC6A14Q9UN76 642 aa15.28■□□□□ 0.04
SHMT2-235ENST00000557740 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms