RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TRIM61Q5EBN2 209 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 KIAA1211LQ6NV74 962 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 FOXR2Q6PJQ5 311 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 TMEM270Q6UE05 265 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 SYT12Q8IV01 421 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 DENND1CQ8IV53 801 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 PPM1KQ8N3J5 372 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 NUSAP1Q9BXS6 441 aaKnown RBP14.83□□□□□ -0.04
SNX6-210ENST00000557341 CD248Q9HCU0 757 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 CACNA2D2Q9NY47 1150 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 KIAA1257Q9ULG3 409 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 RAD54BQ9Y620 910 aa14.83□□□□□ -0.04
SNX6-210ENST00000557341 ATXN2Q99700 1313 aaKnown RBP14.83□□□□□ -0.04
SNX6-210ENST00000557341 CEP295Q9C0D2 2601 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 CACNA1BQ00975 2339 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 NPC1O15118 1278 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 P4HA2O15460 535 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 KCNK5O95279 499 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 PAEPP09466 180 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 HARS2P49590 506 aaKnown RBP14.82□□□□□ -0.04
SNX6-210ENST00000557341 STARD3Q14849 445 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 E2F5Q15329 346 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 PEAR1Q5VY43 1037 aaPredicted RBP14.82□□□□□ -0.04
SNX6-210ENST00000557341 PSAPL1Q6NUJ1 521 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 TTI2Q6NXR4 508 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 ANKS1BQ7Z6G8 1248 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 FMNL3Q8IVF7 1028 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 FAM217AQ8IXS0 508 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 UBA3Q8TBC4 463 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 RNF139Q8WU17 664 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 UCMAQ8WVF2 138 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 NELFBQ8WX92 580 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 KCTD13Q8WZ19 329 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 NDRG1Q92597 394 aaKnown RBP14.82□□□□□ -0.04
SNX6-210ENST00000557341 P2RY11Q96G91 374 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 CNGB3Q9NQW8 809 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 CTNND2Q9UQB3 1225 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 HBS1LQ9Y450 684 aaKnown RBP14.82□□□□□ -0.04
SNX6-210ENST00000557341 STON1Q9Y6Q2 735 aa14.82□□□□□ -0.04
SNX6-210ENST00000557341 FRYQ5TBA9 3013 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 IGHV1OR15-9A0A0B4J2B8 117 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 ITPKAP23677 461 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 NOVA1P51513 510 aaKnown RBP14.81□□□□□ -0.04
SNX6-210ENST00000557341 ZNF132P52740 706 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 ZNF445P59923 1031 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 IRX4P78413 519 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 EIF4HQ15056 248 aaKnown RBP14.81□□□□□ -0.04
SNX6-210ENST00000557341 STILQ15468 1287 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 TRIP4Q15650 581 aaPredicted RBP14.81□□□□□ -0.04
SNX6-210ENST00000557341 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 PKDCCQ504Y2 493 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 N4BP2L1Q5TBK1 243 aaPredicted RBP14.81□□□□□ -0.04
SNX6-210ENST00000557341 BSPRYQ5W0U4 402 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 LCLAT1Q6UWP7 414 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 SCML4Q8N228 414 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 DDI1Q8WTU0 396 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 EDEM1Q92611 657 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 ERLEC1Q96DZ1 483 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 ABCC13Q9NSE7 274 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 TMEM74BQ9NUR3 256 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 PILRBQ9UKJ0 227 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 ANGPTL2Q9UKU9 493 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 CYP8B1Q9UNU6 501 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNX6-210ENST00000557341 PCDHB4Q9Y5E5 795 aa14.81□□□□□ -0.04
SNX6-210ENST00000557341 USP24Q9UPU5 2620 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 TMEM131Q92545 1883 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 YJEFN3A6XGL0 299 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 E7ENQ6 273 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 M0QYV0 167 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 CDX4O14627 284 aaPredicted RBP14.8□□□□□ -0.04
SNX6-210ENST00000557341 LCP1P13796 627 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 BMP6P22004 513 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 PMLP29590 882 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 DAOAP59103 153 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 ZNF33AQ06730 810 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 PAK1Q13153 545 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 MORC3Q14149 939 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 SLC23A3Q6PIS1 610 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 KIAA1324Q6UXG2 1013 aaKnown RBP14.8□□□□□ -0.04
SNX6-210ENST00000557341 RABEPKQ7Z6M1 372 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 RBBP8NLQ8NC74 664 aaPredicted RBP14.8□□□□□ -0.04
SNX6-210ENST00000557341 TFAP2BQ92481 460 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 PIWIL1Q96J94 861 aaKnown RBP14.8□□□□□ -0.04
SNX6-210ENST00000557341 MRGPRX1Q96LB2 322 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 SLC2A11Q9BYW1 496 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 THAP10Q9P2Z0 257 aaPredicted RBP14.8□□□□□ -0.04
SNX6-210ENST00000557341 SFMBT1Q9UHJ3 866 aa14.8□□□□□ -0.04
SNX6-210ENST00000557341 PPP1R3GB7ZBB8 358 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 WASH3PC4AMC7 463 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 BIN1O00499 593 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 LATS1O95835 1130 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 GNA14O95837 355 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 CFIP05156 583 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 ENGP17813 658 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 BRD2P25440 801 aaKnown RBP14.79□□□□□ -0.04
SNX6-210ENST00000557341 HOXD9P28356 352 aaPredicted RBP14.79□□□□□ -0.04
SNX6-210ENST00000557341 IL12RB1P42701 662 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 RGS7P49802 495 aa14.79□□□□□ -0.04
SNX6-210ENST00000557341 GCNT1Q02742 428 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms