RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	C10orf120	Q5SQS8	335 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FYB2	Q5VWT5	728 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KRBA2	Q6ZNG9	492 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	INTS8	Q75QN2	995 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	TRMT11	Q7Z4G4	463 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CHPF	Q8IZ52	775 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	OR2I1P	Q8NGU4	316 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	BHMT	Q93088	406 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SPACA7	Q96KW9	195 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	MRGPRX1	Q96LB2	322 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SPATA32	Q96LK8	384 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	TMEM8A	Q9HCN3	771 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CLIC5	Q9NZA1	410 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	DNMT3L	Q9UJW3	386 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	NAGPA	Q9UK23	515 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	RALY	Q9UKM9	306 aa	Known RBP	11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PCDH15	Q96QU1	1955 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KNL1	Q8NG31	2342 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ATRX	P46100	2492 aa		11.74	□□□□□ -0.53
HNRNPC-231	ENST00000557336	UPK3BL1	B0FP48	263 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	UPK3BL2	E5RIL1	263 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	TULP2	O00295	520 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	HSP90AA1	P07900	732 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	HOXD12	P35452	270 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PSMC2	P35998	433 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	DGKG	P49619	791 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	MFAP3	P55082	362 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FAM193A	P78312	1265 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	RPL6	Q02878	288 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ZNF33A	Q06730	810 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	LMAN2	Q12907	356 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FOXC1	Q12948	553 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ADAM9	Q13443	819 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	BYSL	Q13895	437 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	GEN1	Q17RS7	908 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	RAB41	Q5JT25	222 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	NDRG1	Q92597	394 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	GATA6	Q92908	595 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PIWIL1	Q96J94	861 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	XPO6	Q96QU8	1125 aa	Known RBP	11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	MMRN2	Q9H8L6	949 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CISH	Q9NSE2	258 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SLC6A14	Q9UN76	642 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CYP8B1	Q9UNU6	501 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SLC27A6	Q9Y2P4	619 aa		11.73	□□□□□ -0.53
HNRNPC-231	ENST00000557336		A0A1W2PQ27	194 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336		A0A1W2PQ64	194 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336		A0A1W2PQD8	194 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KCNJ18	B7U540	433 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	GFRA2	O00451	464 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	AP5Z1	O43299	807 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	GJB3	O75712	270 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SERPINF2	P08697	491 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CD59	P13987	128 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	GTF2H1	P32780	548 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FUT11	Q495W5	492 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PREPL	Q4J6C6	727 aa	Predicted RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CBWD6	Q4V339	395 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CBWD3	Q5JTY5	395 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CBWD5	Q5RIA9	395 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	TMEM215	Q68D42	235 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ARHGAP17	Q68EM7	881 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KRT39	Q6A163	491 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	UNQ6494/PRO21346	Q6UXR6	183 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SLC36A4	Q6YBV0	504 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PIGZ	Q86VD9	579 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KDF1	Q8NAX2	398 aa	Predicted RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	HEXIM2	Q96MH2	286 aa	Known RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SCNM1	Q9BWG6	230 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	NUSAP1	Q9BXS6	441 aa	Known RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	UBXN6	Q9BZV1	441 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	MKRN2	Q9H000	416 aa	Known RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	LSM7	Q9UK45	103 aa	Known RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	AGO1	Q9UL18	857 aa	Known RBP	11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	STON1	Q9Y6Q2	735 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	MYH10	P35580	1976 aa		11.72	□□□□□ -0.53
HNRNPC-231	ENST00000557336	LOC400499	M0QZD8	3231 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	SPAAR	A0A1B0GVQ0	90 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ZNF202	O95125	648 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KIF20A	O95235	890 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CFI	P05156	583 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	HMBS	P08397	361 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KRT13	P13646	458 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CORO1A	P31146	461 aa	Known RBP	11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	IL12RB1	P42701	662 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PMS1	P54277	932 aa	Known RBP	11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	KRT85	P78386	507 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	EFEMP1	Q12805	493 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	DUOXA1	Q1HG43	343 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	EDRF1	Q3B7T1	1238 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	PM20D1	Q6GTS8	502 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FAM217A	Q8IXS0	508 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	TRIML1	Q8N9V2	468 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FBXL13	Q8NEE6	735 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	CEP76	Q8TAP6	659 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	TMEM176A	Q96HP8	235 aa		11.71	□□□□□ -0.53
HNRNPC-231	ENST00000557336	FAXDC2	Q96IV6	333 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms