RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 DUSP1P28562 367 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 IGHMBP2P38935 993 aaKnown RBP4.77□□□□□ -1.65
KTN1-225ENST00000557267 GSTM5P46439 218 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 TMEM196Q5HYL7 178 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 CRELD2Q6UXH1 353 aaPredicted RBP4.77□□□□□ -1.65
KTN1-225ENST00000557267 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.77□□□□□ -1.652e-6■■■□□ 19.2
KTN1-225ENST00000557267 SAMD14Q8IZD0 417 aaPredicted RBP4.77□□□□□ -1.65
KTN1-225ENST00000557267 PIGKQ92643 395 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 AKAP1Q92667 903 aaKnown RBP eCLIP4.77□□□□□ -1.65
KTN1-225ENST00000557267 TRMT61AQ96FX7 289 aaKnown RBP4.77□□□□□ -1.65
KTN1-225ENST00000557267 SNX27Q96L92 541 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 C8orf48Q96LL4 319 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 SENP7Q9BQF6 1050 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 TRMOQ9BU70 441 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 SCNM1Q9BWG6 230 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 EIF2AQ9BY44 585 aaKnown RBP4.77□□□□□ -1.65
KTN1-225ENST00000557267 PCDHAC1Q9H158 963 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 ASNSD1Q9NWL6 643 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 HEY2Q9UBP5 337 aa4.77□□□□□ -1.65
KTN1-225ENST00000557267 C2CD4BA6NLJ0 364 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 APAF1O14727 1248 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 VIPP01282 170 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 EGR1P18146 543 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 MMP8P22894 467 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 ME1P48163 572 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 SLC12A2P55011 1212 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 LINC00205P59089 165 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 SRSF1Q07955 248 aaKnown RBP eCLIP4.76□□□□□ -1.65
KTN1-225ENST00000557267 SEMA3BQ13214 749 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 MTA1Q13330 715 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 PMS2P11Q13670 270 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 ATP1A4Q13733 1029 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 SLC5A9Q2M3M2 681 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 P3H1Q32P28 736 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 FAM90A2PQ658T7 463 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 RAP1GAP2Q684P5 730 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 TLDC1Q6P9B6 456 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 KIAA0408Q6ZU52 694 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 TFAP2DQ7Z6R9 452 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 PIP4P1Q86T03 277 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 UEVLDQ8IX04 471 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 CLASRPQ8N2M8 674 aaKnown RBP4.76□□□□□ -1.65
KTN1-225ENST00000557267 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 ARFGAP1Q8N6T3 406 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 WASF1Q92558 559 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 VCPIP1Q96JH7 1222 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 CCDC136Q96JN2 1154 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 ZFYVE19Q96K21 471 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 POT1Q9NUX5 634 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 ZMYND8Q9ULU4 1186 aaPredicted RBP4.76□□□□□ -1.65
KTN1-225ENST00000557267 HS3ST3B1Q9Y662 390 aa4.76□□□□□ -1.65
KTN1-225ENST00000557267 TTC3P53804 2025 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 NDST3O95803 873 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 MYL3P08590 195 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 SNHG28P0DPA3 235 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 TRIM27P14373 513 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 ST6GAL1P15907 406 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 RPS6KB1P23443 525 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 GABRB3P28472 473 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 CCKBRP32239 447 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 RAPGEF1Q13905 1077 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 ARL13BQ3SXY8 428 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 ARHGAP15Q53QZ3 475 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 CCDC144NLQ6NUI1 221 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 RBM44Q6ZP01 1051 aaKnown RBP4.75□□□□□ -1.65
KTN1-225ENST00000557267 FAM57BQ71RH2 274 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 SKAP1Q86WV1 359 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 ZDHHC17Q8IUH5 632 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 OR52L2PQ8NGH6 319 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 OVCA2Q8WZ82 227 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 PMM1Q92871 262 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.75□□□□□ -1.65
KTN1-225ENST00000557267 EBF3Q9H4W6 596 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 TMEM45AQ9NWC5 275 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 MAN2B2Q9Y2E5 1009 aa4.75□□□□□ -1.65
KTN1-225ENST00000557267 CCDC187A0A096LP49 1063 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 SLC22A23A1A5C7 686 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 C16orf96A6NNT2 1141 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 F8W810 466 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 H3BNX3 289 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 PRYO14603 147 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 TULP3O75386 442 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 HARSP12081 509 aaKnown RBP4.74□□□□□ -1.65
KTN1-225ENST00000557267 PECAM1P16284 738 aaPredicted RBP4.74□□□□□ -1.65
KTN1-225ENST00000557267 TFEBP19484 476 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 TNFSF4P23510 183 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 HOXA7P31268 230 aaPredicted RBP4.74□□□□□ -1.65
KTN1-225ENST00000557267 NSUN2Q08J23 767 aaKnown RBP eCLIP4.74□□□□□ -1.65
KTN1-225ENST00000557267 MTX1Q13505 466 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 HLTFQ14527 1009 aaKnown RBP eCLIP4.74□□□□□ -1.65
KTN1-225ENST00000557267 FBXO38Q6PIJ6 1188 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 TTC30AQ86WT1 665 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 ZNF548Q8NEK5 533 aaPredicted RBP4.74□□□□□ -1.65
KTN1-225ENST00000557267 NSMCE1Q8WV22 266 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 CELF1Q92879 486 aaKnown RBP4.74□□□□□ -1.65
KTN1-225ENST00000557267 TRIM2Q9C040 744 aa4.74□□□□□ -1.65
KTN1-225ENST00000557267 AGO4Q9HCK5 861 aaKnown RBP4.74□□□□□ -1.65
KTN1-225ENST00000557267 TMEM8AQ9HCN3 771 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms