RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 XYLT2Q9H1B5 865 aa14.65□□□□□ -0.06
ACTN1-219ENST00000556432 OSER1Q9NX31 292 aa14.65□□□□□ -0.06
ACTN1-219ENST00000556432 NAGPAQ9UK23 515 aa14.65□□□□□ -0.06
ACTN1-219ENST00000556432 FBXO10Q9UK96 956 aa14.65□□□□□ -0.06
ACTN1-219ENST00000556432 SCML2Q9UQR0 700 aa14.65□□□□□ -0.06
ACTN1-219ENST00000556432 NUMA1Q14980 2115 aa14.65□□□□□ -0.06
ACTN1-219ENST00000556432 MYH10P35580 1976 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 TMEM131Q92545 1883 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 ENC1O14682 589 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 CLIC2O15247 247 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 STC2O76061 302 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 STAU1O95793 577 aaKnown RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 PENKP01210 267 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 FAM200BP0CF97 657 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 CHKAP35790 457 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 ENPP2Q13822 863 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 EIF4HQ15056 248 aaKnown RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 FNDC3BQ53EP0 1204 aaKnown RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 FYB2Q5VWT5 728 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 GPRIN1Q7Z2K8 1008 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 GPR155Q7Z3F1 870 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 GATAD2AQ86YP4 633 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 LSM14AQ8ND56 463 aaKnown RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 OR2T3Q8NH03 318 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 ELMO3Q96BJ8 720 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 BTBD1Q9H0C5 482 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 AGPAT3Q9NRZ7 376 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 RASAL2Q9UJF2 1139 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 ZNF510Q9Y2H8 683 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 CLIC4Q9Y696 253 aa14.64□□□□□ -0.07
ACTN1-219ENST00000556432 MUC22E2RYF6 1773 aaPredicted RBP14.64□□□□□ -0.07
ACTN1-219ENST00000556432 CBX4O00257 560 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 RFPL3O75679 317 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 LDOC1O95751 146 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 TRIM21P19474 475 aaKnown RBP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 ABCB4P21439 1286 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 CD27P26842 260 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 CORO1AP31146 461 aaKnown RBP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 BCAT1P54687 386 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 CFHR1Q03591 330 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 TARDBPQ13148 414 aaKnown RBP eCLIP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 TAF1BQ53T94 588 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 KCNT1Q5JUK3 1230 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 HES3Q5TGS1 186 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 KLHDC10Q6PID8 442 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 NELFCDQ8IXH7 590 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 PDILTQ8N807 584 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 XXYLT1Q8NBI6 393 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 GANCQ8TET4 914 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 DDI1Q8WTU0 396 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 ZNF516Q92618 1163 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 BIRC7Q96CA5 298 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 P2RY11Q96G91 374 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 TMX3Q96JJ7 454 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 CNDP2Q96KP4 475 aaKnown RBP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 ARID3AQ99856 593 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 ACE2Q9BYF1 805 aaPredicted RBP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 SDCBP2Q9H190 292 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 NMUR1Q9HB89 426 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.63□□□□□ -0.07
ACTN1-219ENST00000556432 PCDHGA1Q9Y5H4 931 aa14.63□□□□□ -0.07
ACTN1-219ENST00000556432 TEX51A0A1B0GUA7 166 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 VPS37CA5D8V6 355 aaPredicted RBP14.62□□□□□ -0.07
ACTN1-219ENST00000556432 EIF3DO15371 548 aaKnown RBP eCLIP14.62□□□□□ -0.07
ACTN1-219ENST00000556432 DFNA5O60443 496 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 KIF20AO95235 890 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 KLKB1P03952 638 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 ITGAVP06756 1048 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 RALAP11233 206 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 P4HA1P13674 534 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 HOXD13P35453 343 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CTSKP43235 329 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CASP4P49662 377 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 NDST1P52848 882 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CXADRP78310 365 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CEBPZQ03701 1054 aaKnown RBP14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CCDC173Q0VFZ6 552 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 NCOA4Q13772 614 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 TTC31Q49AM3 519 aaPredicted RBP14.62□□□□□ -0.07
ACTN1-219ENST00000556432 ZNF366Q8N895 744 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 C12orf29Q8N999 325 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 PIWIL1Q96J94 861 aaKnown RBP14.62□□□□□ -0.07
ACTN1-219ENST00000556432 DCLK3Q9C098 648 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CSNK1G1Q9HCP0 422 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 OSGEPQ9NPF4 335 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 HMGXB4Q9UGU5 601 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 PCDHA5Q9Y5H7 936 aa14.62□□□□□ -0.07
ACTN1-219ENST00000556432 SRPRBQ9Y5M8 271 aaKnown RBP14.62□□□□□ -0.07
ACTN1-219ENST00000556432 CKAP5Q14008 2032 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 CAPN8A6NHC0 703 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 FAM47DPA6NHR8 397 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 TIMM44O43615 452 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 DNTTP04053 509 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 CDK4P11802 303 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 ASIC1P78348 528 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 COG7P83436 770 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 EFEMP1Q12805 493 aa14.61□□□□□ -0.07
ACTN1-219ENST00000556432 CAMK2GQ13555 558 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms