RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 APOL5Q9BWW9 433 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 SPATA31A1Q5TZJ5 1347 aa5.94□□□□□ -1.46
PRPF39-209ENST00000556353 TTC3P53804 2025 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 INPPL1O15357 1258 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 CNOT3O75175 753 aaKnown RBP5.93□□□□□ -1.46
PRPF39-209ENST00000556353 DGKQP52824 942 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 SRSF1Q07955 248 aaKnown RBP eCLIP5.93□□□□□ -1.46
PRPF39-209ENST00000556353 MTAPQ13126 283 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 DAG1Q14118 895 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 ACOX1Q15067 660 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 RRAGBQ5VZM2 374 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 ZNF517Q6ZMY9 492 aaPredicted RBP5.93□□□□□ -1.46
PRPF39-209ENST00000556353 KRT28Q7Z3Y7 464 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 PIP4P1Q86T03 277 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 WDR75Q8IWA0 830 aaKnown RBP5.93□□□□□ -1.46
PRPF39-209ENST00000556353 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.93□□□□□ -1.46
PRPF39-209ENST00000556353 SUN3Q8TAQ9 357 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 EBF3Q9H4W6 596 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 POT1Q9NUX5 634 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 HEY2Q9UBP5 337 aa5.93□□□□□ -1.46
PRPF39-209ENST00000556353 KIF21BO75037 1637 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 WDR7Q9Y4E6 1490 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 RHPN2P1A8MT19 583 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 CD63P08962 238 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 ATICP31939 592 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 CPA2P48052 419 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 ME1P48163 572 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 WDR5P61964 334 aaKnown RBP5.92□□□□□ -1.46
PRPF39-209ENST00000556353 TTC17Q96AE7 1141 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 PRR11Q96HE9 360 aaPredicted RBP5.92□□□□□ -1.46
PRPF39-209ENST00000556353 SAP30LQ9HAJ7 183 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 AS3MTQ9HBK9 375 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 ZBTB26Q9HCK0 441 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 SEMA5BQ9P283 1151 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 CORO2BQ9UQ03 480 aa5.92□□□□□ -1.46
PRPF39-209ENST00000556353 FAM90A10PA6NDY2 464 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 USP12O75317 370 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 MBPP02686 304 aaPredicted RBP5.91□□□□□ -1.46
PRPF39-209ENST00000556353 HOXB6P17509 224 aaKnown RBP5.91□□□□□ -1.46
PRPF39-209ENST00000556353 RAE1P78406 368 aaKnown RBP5.91□□□□□ -1.46
PRPF39-209ENST00000556353 AASDHQ4L235 1098 aaPredicted RBP5.91□□□□□ -1.46
PRPF39-209ENST00000556353 SAMD14Q8IZD0 417 aaPredicted RBP5.91□□□□□ -1.46
PRPF39-209ENST00000556353 ARFGAP1Q8N6T3 406 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 ABHD5Q8WTS1 349 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 ZFYVE19Q96K21 471 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 TRMOQ9BU70 441 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 HS3ST3B1Q9Y662 390 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 LRRIQ1Q96JM4 1722 aa5.91□□□□□ -1.46
PRPF39-209ENST00000556353 ADGRL1O94910 1474 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 FRMPD1Q5SYB0 1578 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 RRHO14718 337 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 CCNT2O60583 730 aaKnown RBP5.9□□□□□ -1.46
PRPF39-209ENST00000556353 PQBP1O60828 265 aaKnown RBP5.9□□□□□ -1.46
PRPF39-209ENST00000556353 PLAUP00749 431 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 PBX1P40424 430 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 GPS1Q13098 491 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 FHL3Q13643 280 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 ZNF793Q6ZN11 406 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 ATP11CQ8NB49 1132 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 TIFAQ96CG3 184 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 LRRC46Q96FV0 321 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 TM2D2Q9BX73 214 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 TMOD4Q9NZQ9 345 aa5.9□□□□□ -1.46
PRPF39-209ENST00000556353 HEMK1Q9Y5R4 338 aaPredicted RBP5.9□□□□□ -1.46
PRPF39-209ENST00000556353 SIGLEC1Q9BZZ2 1709 aa5.9□□□□□ -1.47
PRPF39-209ENST00000556353 ABCA9Q8IUA7 1624 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 RAPGEF6Q8TEU7 1601 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 CLCA1A8K7I4 914 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 AREL1O15033 823 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 COQ9O75208 318 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 LINC00205P59089 165 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 RAPGEF1Q13905 1077 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 KCNJ12Q14500 433 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 CNGA3Q16281 694 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 EARS2Q5JPH6 523 aaKnown RBP5.89□□□□□ -1.47
PRPF39-209ENST00000556353 FAXCQ5TGI0 409 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 ABLIM2Q6H8Q1 611 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 CRTC1Q6UUV9 634 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 PIM3Q86V86 326 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 DGKHQ86XP1 1220 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 ZNF548Q8NEK5 533 aaPredicted RBP5.89□□□□□ -1.47
PRPF39-209ENST00000556353 MPLKIPQ8TAP9 179 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 TRMT61AQ96FX7 289 aaKnown RBP5.89□□□□□ -1.47
PRPF39-209ENST00000556353 FCRL5Q96RD9 977 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 SCNM1Q9BWG6 230 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 RNF26Q9BY78 433 aaPredicted RBP5.89□□□□□ -1.47
PRPF39-209ENST00000556353 DDX21Q9NR30 783 aaKnown RBP eCLIP5.89□□□□□ -1.47
PRPF39-209ENST00000556353 ABHD10Q9NUJ1 306 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 VPS4AQ9UN37 437 aa5.89□□□□□ -1.47
PRPF39-209ENST00000556353 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.89□□□□□ -1.47
PRPF39-209ENST00000556353 A0A087WZ62 844 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 C2CD4BA6NLJ0 364 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 TTC34A8MYJ7 566 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 H3BNX3 289 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 TULP3O75386 442 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 OAZ2O95190 189 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 SLC3A2P08195 630 aaKnown RBP5.88□□□□□ -1.47
PRPF39-209ENST00000556353 PSG1P11464 419 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 DRD1P21728 446 aa5.88□□□□□ -1.47
PRPF39-209ENST00000556353 MTX1Q13505 466 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms