RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 IER2Q9BTL4 223 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 TRMT61BQ9BVS5 477 aaKnown RBP4.1□□□□□ -1.75
LINC00648-202ENST00000555985 SLC4A5Q9BY07 1137 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 IMPG2Q9BZV3 1241 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 TTYH3Q9C0H2 523 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 SMG9Q9H0W8 520 aaKnown RBP4.1□□□□□ -1.75
LINC00648-202ENST00000555985 LHX5Q9H2C1 402 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 LTB4R2Q9NPC1 389 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 FAM49BQ9NUQ9 324 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 TDP1Q9NUW8 608 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 GMIPQ9P107 970 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 FBXO10Q9UK96 956 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 TSPAN16Q9UKR8 245 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 RPS6KL1Q9Y6S9 549 aa4.1□□□□□ -1.75
LINC00648-202ENST00000555985 TRAV19A0A0A6YYK7 116 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 KANSL1LA0AUZ9 987 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 PROB1E7EW31 1015 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TRDMT1O14717 391 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 EPHB6O15197 1021 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CBFA2T2O43439 604 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 KIAA0754O94854 1291 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CALCAP01258 141 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 SETSIPP0DME0 302 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CHRNB1P11230 501 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CD58P19256 250 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 RFX1P22670 979 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ARHGAP25P42331 645 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GABRB2P47870 512 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 PDE6CP51160 858 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 BCAT1P54687 386 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 UBASH3AP57075 661 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 YWHAEP62258 255 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GOLGA8FQ08AF8 430 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GOLGA8DPQ0D2H9 430 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 BST2Q10589 180 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GRM2Q14416 872 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TMEM196Q5HYL7 178 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CEP85LQ5SZL2 805 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 PMF1Q6P1K2 205 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TXNDC11Q6PKC3 985 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TOGARAM2Q6ZUX3 1019 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 HTR3DQ70Z44 454 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TMEM110Q86TL2 294 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 PIGZQ86VD9 579 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 VSTM4Q8IW00 320 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 FAM114A1Q8IWE2 563 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ETFBKMTQ8IXQ9 262 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 MAB21L3Q8N8X9 362 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ST13P5Q8NFI4 369 aaPredicted RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 MAGEC3Q8TD91 643 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 BPIFB1Q8TDL5 484 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 IRGQQ8WZA9 623 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ERGIC2Q96RQ1 377 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 FBXO44Q9H4M3 255 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CCSER2Q9H7U1 834 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 MMRN2Q9H8L6 949 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TBC1D17Q9HA65 648 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 FANCLQ9NW38 375 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 IRAK4Q9NWZ3 460 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 MARK1Q9P0L2 795 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CPSF2Q9P2I0 782 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 NOCTQ9UK39 431 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 HCN2Q9UL51 889 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 HPCAL4Q9UM19 191 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 NFE2L3Q9Y4A8 694 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 VPS13AQ96RL7 3174 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 E2F8A0AVK6 867 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 LGALS16A8MUM7 142 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 LEFTY2O00292 366 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 SNUPNO95149 360 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 COL9A1P20849 921 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TARSP26639 723 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ANXA13P27216 316 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ADORA2BP29275 332 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GCKP35557 465 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 OPRD1P41143 372 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 SLC8A3P57103 927 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 MYL5Q02045 173 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ACTN3Q08043 901 aaPredicted RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GAS6Q14393 721 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 RBBP5Q15291 538 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 STILQ15468 1287 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 EXOC3L4Q17RC7 722 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 GOLGA7BQ2TAP0 167 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ZNF528Q3MIS6 628 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 SGO2Q562F6 1265 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 TCERG1LQ5VWI1 586 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 RRAGAQ7L523 313 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 YTHDF3Q7Z739 585 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 RALGPS2Q86X27 583 aaPredicted RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 SCN4BQ8IWT1 228 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ADGRG2Q8IZP9 1017 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 ARL14EPQ8N8R7 260 aaPredicted RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 IRF7Q92985 503 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 PBXIP1Q96AQ6 731 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 LMLNQ96KR4 655 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 HSFY1Q96LI6 401 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 PAIP2Q9BPZ3 127 aaKnown RBP4.09□□□□□ -1.75
LINC00648-202ENST00000555985 CAPS2Q9BXY5 557 aa4.09□□□□□ -1.75
LINC00648-202ENST00000555985 C8orf33Q9H7E9 229 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms